Coregonus clupeaformis (lake whitefish): 121586315
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Entry
121586315 CDS
T08357
Name
(RefSeq) small conductance calcium-activated potassium channel protein 3 isoform X1
KO
K04944
potassium intermediate/small conductance calcium-activated channel subfamily N member 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121586315
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
121586315
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
DUF898
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
121586315
NCBI-ProteinID:
XP_041758848
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Position
17:35523181..35548456
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AA seq
546 aa
AA seq
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MTSTQSPYKGLRMSQMDLKETESGPPSEGGQRLEATSMEMQDRQSLPEIIITTKDDYQPH
APNQTPSSDKNHPKSEAKAAYGGGEETSVAQHKDGVHNCPHKKTQSIGRRLVRRRALFER
RQRLNDCALAAGMFGVVVMITETELSWSIYSKSSIYSMAMKCVISLSSLILLGLIIAYHI
CEVQLYIHDNGSEDWQIAMTMERVSLIALELFVAAVHPFPVGLPLSWQAMSPTLSETELE
IVLALPMFLRLYLLGRALMLHSRLYTDTASRSIGALNKIHFNSRFVVKTLMTIYPGTMLM
IFSVSLWLVAAWGLHVCERHHNYKDLSSNYMEALWMVSVTFLSIGYGDVVPNTYCGRSIC
LLTGIMGAGCTVLVVAVVARKLELTRAEKHVHNFMMDSHFTKGIKIAAANVLRETWMIYK
HTKLARERDHCRVRMHQRKLLLAIHQLRDVKMERRKLADQANTLVDLCKMQNLMYDVLSE
VSGFRGDLETHINSLQQNVEELREGFRTLMPLLSSTLSTQNSSIRHLLREREEQPDTENG
RAGYVR
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgacatccactcagtctccctacaaaggactccgcatgtctcaaatggacttaaaggag
acagaaagtgggccacccagtgaaggaggtcaaaggctggaggccacatcaatggagatg
caggaccgccagagtctacccgagatcatcattacaaccaaagatgactaccagccacat
gctcccaaccaaacacccagctctgacaagaatcaccccaagtctgaggccaaggctgcc
tatggtggaggtgaggagaccagtgttgcgcagcacaaggatggtgtccataactgccct
cacaagaagacccagagcatcggtcgtaggctggtccgccgaagggcactgtttgagagg
aggcagaggctgaatgactgtgcactcgctgcggggatgtttggagtggtggtcatgatc
accgagacagagctctcctggagcatctacagtaagagctccatatattccatggctatg
aagtgtgttatcagcctgtcctctcttatcctgctgggtctgatcattgcctaccacatc
tgtgaggtgcagctctacatccatgataatggatcagaggactggcaaattgccatgaca
atggagcgggtgagcctgatcgccctggagctgtttgtagcggcggtacacccgttccca
gtgggtctgccattgtcatggcaagccatgtcccccacgctgtcagagacagagctggag
atcgtgctggctctgcccatgttcctgcgactctacctcctgggtcgtgccttgatgctg
cacagccgactctacacagacaccgcctcgcgcagcattggcgccctcaacaagatccac
ttcaacagccgttttgtggtcaaaaccctgatgacaatctaccctggcactatgttgatg
atcttcagcgtctctctgtggctagtcgctgcatggggcctacatgtctgtgagagacac
cacaactataaggacctgagcagtaactacatggaggccctgtggatggtctcggtcacc
ttcttgtccattggttacggggatgttgttcccaacacctactgtggccgcagcatctgt
ctactcactggcatcatgggggctggttgcacagtgctggtggttgccgtggttgccagg
aaactggagctgactagggcagagaaacacgtccacaacttcatgatggactcccatttt
acaaaagggataaaaattgctgcagcaaatgtactaagagagacttggatgatctacaaa
cacaccaagcttgccagggagagagaccactgtagagtacgcatgcaccagaggaagctg
ctactcgccatccaccagctgcgtgatgtgaagatggagaggaggaagttggctgatcag
gccaacacgcttgtggatctctgcaagatgcagaatctgatgtatgacgtgctgtcagag
gtgagtggattccgaggggacctggaaacacacataaacagtctgcagcagaatgtggag
gagctgagagaaggcttcaggaccctgatgcccctcctctccagcaccctctccacacag
aactcttccatccgccacctgctaagggagagggaagagcagccagacacggagaatggg
agggcaggatatgtaagatag
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