Coregonus clupeaformis (lake whitefish): 121586322
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Entry
121586322 CDS
T08357
Name
(RefSeq) CUGBP Elav-like family member 3 isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121586322
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121586322
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RNA_bind
Motif
Other DBs
NCBI-GeneID:
121586322
NCBI-ProteinID:
XP_041758856
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All DBs
Position
17:35963405..35998841
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AA seq
483 aa
AA seq
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MKEADAIKLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCERES
ALKAQNALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSDADVRKMFEAFGS
IEECTVLRGPDGTSKGCAFVKYQNNTEAAAAISTLHGSRTLPGASSSLVVKFADSEKERG
IRRMQQVASQLGVISPMTLHLGAYNAYTQVLVQQQALVAQSAYLSPVSTITMQQLAALNP
SSLIATPIASLTTSGTSTPPTMAATTVPALPPPLSYPPVPAPLNGQSASETLYTNGIHSY
QAQSPVLDPLQQAYAGMQHYTGGAVVSPFESLKFPGGNFRFEMPSQQSLMFTYANTPTAT
YPAAYGMVGQPFPHQHTMLAQQHQQPQQLQQREGPEGCNIFIYHLPQEFTDSEMLQMFIP
FGNVISAKVFVDRATNQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPKDAN
RPY
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggccgatgcaatcaagctcttcatcgggcagataccccgaaatcttgaggag
aaggacttgaaacccatcttcgaacagttcgggaagatctatgagttgacggtgataaag
gacaaatacacggggatgcacaaaggctgtgccttcctgacatactgcgaacgagagtct
gccctcaaggcccagaatgcactgcacgagcagaagacgctaccagggatgaaccggccc
attcaagtgaagccagcagacagcgagggcagaggggaagacaggaagctgtttgtgggc
atgctggggaagcagcagtctgatgccgacgtgaggaagatgtttgaggcgtttgggagc
attgaagagtgcacagtgctccgtgggcctgacggcactagcaaaggctgtgccttcgtg
aagtaccagaacaacacagaggctgcggcagccatcagcactctgcatgggagccgtact
ctaccgggtgcctcctccagcctggtggtgaagttcgccgactctgagaaagaacgaggg
ataaggcgcatgcagcaggtggcatcccagctgggggtcatcagtcccatgacattacac
ctcggggcttacaatgcctacacacaggtactggtgcaacagcaggctctggtggcccag
tcggcgtacttgtctcctgtatccactatcaccatgcagcagttggctgccctcaacccc
agcagccttattgccacgcccatcgcatcactcactacctcaggtaccagcactccgccc
accatggcagccacaacagtgcctgctctgcctccaccactcagctaccctccagtgcca
gctccactcaatggacagtcagcatctgaaaccctgtacaccaatggaatccattcttac
caagctcagagtccagttttagatcctcttcagcaagcatacgcagggatgcagcactac
acaggtggggcagtagtgagtccgtttgagtccttaaaatttcccggagggaattttagg
tttgaaatgccctctcaacagtccttaatgtttacttatgcaaacacacccacagcaacc
taccctgctgcctatggaatggtggggcagccattcccacaccaacacacaatgcttgca
cagcaacatcagcagcctcagcaactgcagcaacgagaaggtcctgaggggtgtaacatc
ttcatttatcacctgcctcaggagttcactgactcagagatgctgcaaatgttcatcccc
ttcggcaacgtcatctcagcaaaggtctttgttgaccgtgcaaccaatcagagcaagtgc
tttggttttgtgagttttgacaacccgtccagtgcacagacggcaattcaggccatgaat
ggtttccagattggcatgaagaggctcaaggtgcagcttaagaggcccaaggatgccaac
cgaccctactaa
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integrated database retrieval system
