Coregonus clupeaformis (lake whitefish): 121586382
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Entry
121586382 CDS
T08357
Name
(RefSeq) protein argonaute-4 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121586382
03036 Chromosome and associated proteins [BR:
cclu03036
]
121586382
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
121586382
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
121586382
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
121586382
microRNA pathway
RISC loading complex
121586382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
ArgoN
PAZ
ArgoL1
ArgoL2
DUF3284
Motif
Other DBs
NCBI-GeneID:
121586382
NCBI-ProteinID:
XP_041758943
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All DBs
Position
17:complement(40329087..40365836)
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AA seq
888 aa
AA seq
DB search
MEALGPDPPIGPPAPTSLFQPPRRPGMGTVGKPIRLLANHFQVQIPKIDVYHYDIDIKPE
KRPRRVNREVVDTMVRHFKMQIFGDRQPGYDGKRNMYTAHPLPIGRDRVDLEVTLPGEGK
DQTFKVSLQWVSVVSLQMLLEALSGHNEVPEDSVQALDVITRHLPSMRYTPVGRSFFSPP
EGYYHPLGGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPVIEFMCEVLDIQNINE
QTKPLTDSQRVKFTKEIRGGWGPAGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLE
NGQAMECTVAQYFKQKYSLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDN
QTSTMIKATARSAPDRQEEISRLVKSNSMVGGPDPYLKEFGIVVHNDMTEVTGRVLPAPM
LQYGGRVSTDTGRDCGRGLSPQNKTVATPNQGVWDMRGKQFYAGIEIKVWAVACFAPQKQ
CREDLLKSFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFKHLKLSYVGLQLIVVI
LPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINAKLGGINNVLVPH
QRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDGHPSRYCATVRVQTSRQDLSQE
QLYSQEVIQDLTNMVRELLIQFYKSTRFKPTRIIYYRGGVSEGQMKQVAWPELIAIRKAC
ISLEEDYRPGITYIVVQKRHHTRLFCSDKTERVGKSGNVPAGTTVDSTITHPSEFDFYLC
SHAGIQGTSRPSHYHVLWDDNCFTADELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAF
RARYHLVDKDHDSAEGSHVSGQSNGRDPLALAKAVQIHYDTQHTMYFA
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgctcggacccgacccccctataggcccgccggcccccacctccctcttccag
cccccacggaggcctggcatgggcaccgtggggaagcccatccgcctgctggccaatcac
ttccaggtgcagattcccaagattgatgtctatcactacgatatcgacatcaagcctgag
aaacggcctcggagggtcaacagggaggtggtggacacaatggttcggcacttcaagatg
cagatctttggtgatcgacaaccgggctacgacgggaagaggaacatgtatacggcccat
cctctacccatcgggagagacagggtggatttggaagtaactctgccgggggaggggaag
gaccagaccttcaaggtgtctttgcagtgggtgtcggtggtgagcctgcagatgctcctg
gaggccctgtcaggccacaatgaggtccccgaggactctgttcaggccctggacgtcatc
acccgccacctgccttccatgaggtacactccagtggggcgctccttcttctcccctcca
gagggctactaccaccccctgggcggagggagggaggtgtggtttggcttccatcagtcg
gtccgtcctgccatgtggaacatgatgctcaacatcgatgtctctgccaccgctttctac
cgtgcccagcctgtgatcgagttcatgtgcgaggtgctcgacatccagaacatcaacgag
cagaccaagccactcaccgactcccaacgcgtcaagttcaccaaggagatccgaggtggg
tggggacctgcaggtctgaaagtcgaggtcacccactgtggtcagatgaagagaaagtat
cgcgtgtgcaatgtgactcgccgccccgccagccaccaaacgttccctttacagttggag
aatggccaggccatggagtgtacagtggctcagtacttcaagcagaagtacagcctacag
ctcaaatacccccacctgccctgcctacaagtggggcaggaacagaagcacacttatcta
cccctggaggtttgtaatattgtggccgggcagcgctgcatcaagaagctgacagataac
cagacctccaccatgatcaaagctacagcacgttctgcacccgacaggcaggaagagatc
agccgactggtcaaaagcaacagcatggtcggcggtcccgacccctacctgaaggagttt
ggcatcgtggtgcacaacgacatgactgaggtgacgggccgagtcctcccagcgcccatg
ctgcagtatgggggccgggtgagtaccgacactgggcgggactgtggcaggggactctct
ccgcagaataagaccgtggccacgcccaaccagggcgtgtgggacatgcgggggaagcag
ttctacgccgggatagagatcaaggtgtgggccgtggcctgcttcgccccacagaaacag
tgcagagaggacctgctcaagagcttcacagaccaactgaggaagatctcgaaggatgcg
gggatgcccatccagggccagccatgtttctgtaaatacgcccagggagcggacagcgtg
gagcccatgttcaaacacctcaagctgtcctatgtgggactgcagctcatcgtggtcatc
ctacccggcaaaacccctgtctacgcggaggtgaagcgggtaggagacactctcctgggc
atggccactcagtgtgtccaggtgaagaacgtggtgaagacatccccccagaccctctcc
aacctctgcctcaagatcaacgccaagctgggcggcatcaacaatgtcctggtgccccat
cagagaccctctgtgttccagcaacctgtcatcttcctaggggcggacgtcactcaccct
ccagccggcgacggcaagaagccctccatcgcagcggtggtgggcagcatggacggccac
cccagccgctactgtgccacggtgcgcgtgcagacgtcgcgccaggacctgtcccaggag
caactgtacagccaggaggtcatccaggacctgaccaatatggtgcgcgagctgctcatc
cagttctacaagtcaacgcgcttcaagcccacacgcatcatctactaccgcggtggtgtg
tctgagggccaaatgaaacaggtggcgtggccagagctgatcgccatcaggaaggcctgt
atcagcctagaggaggactatcgaccgggcatcacctacatcgtggttcagaaacgccac
cacacccgccttttctgctccgacaagacagagcgagttggaaagagtggcaacgtccca
gccggaaccacggtggacagcacaatcacccacccctccgaatttgacttctacctgtgc
agccatgctgggatccagggcactagccggccctcccactaccacgtcctgtgggacgac
aactgcttcactgccgacgagctccagctgctcacctaccagctgtgccacacctacgtc
cgctgcacccgctctgtctccatccccgcgccagcctactatgccaggctagtggcattc
cgtgcccgctaccacctagtggacaaagatcacgacagtgcggagggcagccacgtgtcg
ggccagagtaacggtcgggaccccctggccctggccaaggcagtccagatccactatgac
actcagcacactatgtattttgcctga
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