Coregonus clupeaformis (lake whitefish): 121586392
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Entry
121586392 CDS
T08357
Name
(RefSeq) elongation factor 1-alpha, oocyte form
KO
K03231
elongation factor 1-alpha
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121586392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121586392
03016 Transfer RNA biogenesis [BR:
cclu03016
]
121586392
03012 Translation factors [BR:
cclu03012
]
121586392
04131 Membrane trafficking [BR:
cclu04131
]
121586392
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121586392
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
121586392
Transfer RNA biogenesis [BR:
cclu03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
121586392
Translation factors [BR:
cclu03012
]
Eukaryotic type
Elongation factors
121586392
Membrane trafficking [BR:
cclu04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
121586392
Exosome [BR:
cclu04147
]
Exosomal proteins
Proteins found in most exosomes
121586392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
121586392
NCBI-ProteinID:
XP_041758971
LinkDB
All DBs
Position
17:40557304..40560845
Genome browser
AA seq
461 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETGRYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAGGV
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSQKRFEEIQKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLEASSNMGWFKGWKVERKDGNANGVTLLEALDSILPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGTLKAGMIVTFAPANVTTEVKSVEMHHETLE
SAMPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAGVFTAQVIILNHPGQISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDAPKFLKSGDAAIVDMIPGKPMCVESFQEYPP
LGRFAVRDMRQTVAVGVIKAVEKKAASSGKVTKSAVKAGKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagatccacatcaacatcgtggtcattggccatgtcgactccggcaag
tccaccaccaccggccatctgatctataagtgcggaggcattgacaagagaaccattgaa
aagttcgagaaggaagcagctgagatgggtaagggctcgttcaagtatgcctgggtgctg
gacaagctgaaggcagagcgtgagcgtggtatcaccatcgacatttccctgtggaagttc
gagactggcaggtactacgtcaccatcattgatgcccctggacacagagatttcatcaag
aacatgatcactggtacatctcaggctgactgtgctgtgcttatcgttgctggtggtgtg
ggtgagtttgaggccggtatctcaaagaatggccagacgcgtgagcacgctctcctcgct
ttcactctgggtgtgaagcagctcattgttggagtcaacaagatggactccaccgagccc
ccctacagccagaagcgttttgaggaaatccagaaggaagtcagcacctacatcaagaag
atcggctacaaccctgccacagtcgcctttgtgccaatctctggatggcatggggacaac
atgctagaggccagcagcaacatgggctggttcaagggatggaaggtcgagcgtaaagat
ggtaacgccaatggtgtgactctgctggaggccctggacagcatcctgcccccatcccgc
cccacagacaagccccttcgtctccccctccaggatgtctacaaaatcggcggtattgga
acagtacccgtgggccgtgtggagactggcaccctgaaggccggtatgatcgtcaccttt
gcccccgctaacgtcaccactgaagtaaagtctgtggagatgcaccacgagaccctggaa
tcggctatgccaggtgacaatgtcggcttcaacgtaaagaacgtgtcagtcaaggatatc
cgtcgtggcaatgtggctggagacagcaagaacgaccctccgatggaggccggcgtcttc
accgctcaagtaatcatcctgaatcaccctggccaaatctcccagggctatgcccccgtg
ctggattgccataccgctcacatcgcctgcaagttcagcgagctcaaggagaagatcgac
cgtcgctctggcaagaagcttgaagatgcccccaagttcctgaagtctggagacgctgct
atcgttgacatgatccccggcaagcccatgtgtgtggagagcttccaggaataccctcca
cttggtcgtttcgctgtgcgtgacatgaggcagaccgttgctgtcggtgtcatcaaggct
gtcgagaagaaggccgcctcaagcggcaaggtcacaaagtctgccgttaaggccggtaaa
aagtga
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