Coregonus clupeaformis (lake whitefish): 121586454
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Entry
121586454 CDS
T08357
Name
(RefSeq) zinc finger and BTB domain-containing protein 22-like
KO
K10502
zinc finger and BTB domain-containing protein 22
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121586454
04121 Ubiquitin system [BR:
cclu04121
]
121586454
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
121586454
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
121586454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-H2C2_2
zf-C2H2
C2CH-4th_BIRD-IDD
zf-C2H2_jaz
zf-C2H2_4
Zn_ribbon_SprT
DUF5810
zf-Di19
DUF2321
Motif
Other DBs
NCBI-GeneID:
121586454
NCBI-ProteinID:
XP_041759079
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All DBs
Position
17:42896774..42901393
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AA seq
695 aa
AA seq
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MHSLSMGQGCSSSSLGAPSGSVVQVCFPSSQASVLDSLNRQREEGQLCDLSIQVQGKVFN
AHRCVLAASSPYFHDQVLLKNMSTVSIPAVMDPLAFESVLSCAYTGQLRMLREDIVNYLT
VGSVLQMWHIVDKCTELLKEGRVVGSGSAAQGVIGGAQGNPGCSSSESSLGAVSAQAGGS
NTQPAAHPPSRPSLSESQSPSSTNYFSPRDANLGGGAAAAGAAGQEGVNATPSYCTPSGA
EEAFLIEEEDEEEEEELMYHRKRGSSRRKRTTSVSDQEVGVSDSFGVSSYQVGDASPLQK
RPTYSQPSIMPRKQWVVVKTERPQDDDLIVVSGEEGPDEEEEKDLELERERTFNISNIRT
LSGELSSRADHEMETQMDYCQSSEDYLKFDSGLMDQTPPQHLHDSAGQSGGRAISALLGH
VQSAAAARAQLFPIDMQGNQILMYSQSSLDSSQPIGIGGGMAGAPFKGPNLEHGAVHLSA
QGGLGGGIDGLDGGGGGSSGKVFMCHCGKTFTHKSMRDRHINMHLDLRPFNCPVCAKKFK
MKHHLTEHMKTHTGHKPYDCHGCGKKFMWRDSFMRHRAHCERRSGAAGRSDDGEGSDRTD
GISPQHLPHLHLSTSEAGQGAVGGRSGISVLSPHHSSTGSSSNAVSCLTMASAGAHLGVT
SQSMLQGQGSVFGLGVSQGGCEEEVCEVGDNDSVT
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgcattctctgtcaatggggcagggctgtagcagcagcagcttaggtgctccctctggc
tcggtggttcaggtgtgcttccccagctcccaggcgtctgtactggacagcctgaaccgg
cagcgtgaggagggccagctctgtgacctctccatccaggtccaggggaaggtgttcaac
gcccaccgctgcgtgctagctgcatcctcaccctactttcatgaccaggtgctcttgaag
aacatgtccaccgtctccatccctgccgtcatggacccgctggcgttcgagagcgtcctg
agctgcgcctacacgggccagctgcgcatgctccgcgaagacatcgtcaactacctcacc
gtgggcagcgtgctgcagatgtggcacatcgtggacaagtgcacagagctcctcaaagag
ggacgggtggtggggagtgggagcgcagctcagggggtcattgggggagcgcaggggaac
cctggatgcagtagcagtgaaagctccctaggggctgtgagtgctcaagcagggggaagc
aacacccagccagccgctcaccctcccagccgtccatccctgagtgagagccagtctccc
agcagcaccaactacttcagccccagagacgccaacttgggagggggagcggcggcagct
ggagctgcagggcaggaaggcgtgaacgccactcccagctactgcaccccttctggggcc
gaggaagccttcctgatcgaagaggaggatgaagaagaggaagaagagctcatgtaccat
aggaagcgagggagcagcaggaggaaacggacaacctctgtctcggaccaagaggttgga
gtcagcgacagcttcggggtgtcgtcgtaccaagtcggggacgcctcccctctccagaag
cgacccacctacagccagcccagcatcatgccccggaagcagtgggtggtggtgaagaca
gagagaccccaggacgatgacctgatcgtggtgtcaggggaggaagggccagatgaggaa
gaggagaaagatttggagttggagagggagaggacattcaacatatctaacatcaggact
ctgtctggagagctgagtagcagagcggaccatgagatggagacacagatggattactgc
cagtcttctgaagactacctcaagtttgacagtggtttgatggaccagactcccccacag
caccttcatgacagcgctggtcagagtggtggcagagccatctctgccctactaggccat
gtccagtctgctgctgctgctagagctcagctctttcccatagacatgcaaggcaaccag
atcctcatgtacagccaatcctctttagactcctctcaacccataggaataggaggtggt
atggctggggcaccatttaaagggccaaacctggagcatggagcggtccatttgtcagca
caggggggtttgggcggtggcatagatggactggacgggggtggtggcgggagttcaggg
aaggtgttcatgtgccactgtggaaagaccttcacccacaagagcatgcgcgaccgccac
atcaacatgcacctggacctgcggcccttcaactgcccggtctgcgccaagaagttcaag
atgaagcaccacctgacagagcacatgaagacccacacggggcacaagccctatgactgc
cacggctgcggcaagaagttcatgtggcgtgacagcttcatgcggcaccgcgcccactgc
gagagacgtagcggggccgctggcaggagcgacgatggggaagggtccgaccgcactgat
ggcatctccccacagcacctccctcatctccacctctcgaccagcgaggccggtcaaggt
gccgttggtggcagaagtgggatctccgtcttgtccccacatcattccagtacaggtagc
agcagcaatgctgtctcttgcctgaccatggccagtgccggagcgcacttaggggtaacc
tctcagagcatgttgcagggtcaaggttctgtgtttggtctgggggtcagccaaggtggg
tgtgaggaggaagtgtgtgaggttggtgataatgatagtgtcacttga
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