Coregonus clupeaformis (lake whitefish): 121586539
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Entry
121586539 CDS
T08357
Name
(RefSeq) receptor-type tyrosine-protein phosphatase U isoform X1
KO
K16662
receptor-type tyrosine-protein phosphatase U [EC:
3.1.3.48
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121586539
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
121586539
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
121586539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
Tc-R-P
Pur_ac_phosph_N
PTPlike_phytase
Ig_DSCAM-DSCAML_C
Y_phosphatase3
DUF4808
SPG48
Motif
Other DBs
NCBI-GeneID:
121586539
NCBI-ProteinID:
XP_041759225
LinkDB
All DBs
Position
17:complement(8068828..8362283)
Genome browser
AA seq
1486 aa
AA seq
DB search
MYSGVFLLMLVVGIYADTMDQGPTAGCTFDDDSDPGLCEYKQGQEDDFDWQLMRTYNWPH
TTPDLLRGSFMMVNSSQHAAGQRAHLLLHSLSENDTHCIQFSYFLYSRDGHSPGDLQLYI
RVNGGPRGSAVWNVSGSHGRQWHQVELAVSTFWPSEYQVVFEASVSAERRGYIAIDDILL
LNYPCYKVPHFSRLGDVEVNAGQNATFQCVATGKTTETEPFLLERRNGVVVAASFIQRLS
HKRLMATFQVEAERGEQDLYRCITESTRGAAVSNFAELIVRVPPTPIAPPQLLRAGPTYL
IIQLNTNSIVGDGPVIRREIEYRASQSPWSETHGVGSLTYKVWHLEPDTEYRISVLLTRP
GEGGTGAPGPPLVSRTKCAEPMRALRGLTATEIQPRQLALQWEPLGYNLTRCHTYSVSLC
YRYSTPAGGSAGNNATVRECLSVERNQSHFTLRDLPPFRSVYVRLALENPEGKKENREVT
FQTEEDIPGGIAPESLTFTPLDDLIFLKWEEPVEPNGVITQYEISYQGIESSDPGINVPG
PRRTVSKLRNETYHMFSGLHPGTTYLVSVRARTTKGFGQTALTEITTNISAPVFDYEDNP
APLSESESTITVLLRPALGRGAPVSTYQVVVLEEDGSRRVRRRRELGSGSDCFPVPASQV
EAQSKGTPHYYTAELPPSSLPKATPFTVGDNHTYNGYWNTPLDPSKNYLVFFQATSYFRG
ETRINCIRIARKAACKDHKRALEVYQHAEDMGLILGACAGGLVVLILLLGAIVIIIKKGR
KKVALNKAAMSYRQEKTRKLGSLDCSMTEQSTLQQDRHTANSFMDAHTCNTRNEQRSSVN
ESSSLLGGSPRRHCRRKSSPYHTGQLHPAVRVADLLQHINQMKTGEGYGFKQEYESFFDG
WDVTKKKDKTKGRHDSLLGHDHHRVKLHSLLADPNSDYGNANYIDIRINREGYQRSNHFI
ATQGPKQEMIYDFWRMVWQENCFSIVMITKLVEVGRMKCCKYWPEDSELYGDIKITLLKT
ETLAQYTVRTFAMERRGYPAKHEVCQFHFTSWPEHGVPYHATGLLAFLRRVKASTPPDAG
PVVVHCSMGAGRTGCYIVLDVMLDMAECEGVVDIYNCVKTLCSRRINMIQTEEQYVFIHD
AILEACLCGETAIPVIEFALTYKEMLRVDSQSNTSQLREEFQTLNSVTPHLDMEECSVSL
LPRNREKNRSMDVLPPDRALAFLVTTEGIAEGSNYINAALTDSFHRPAAFVVTPHPLPGT
TADFWRLVYDYGCTSVVMLNQINQSNSAWVRRGEPCLQYWPEPGLQQFGPMTVELLSMTA
DDDIIIRLFRVQNIMRDPTDPTNQSCPATGTGREDDIHFPSKLQEGQLVVRHFQFLRWSP
YRDVPDSKKAFLSLLAQVHNWQRECGEGRTIIHCLNGGGRSGTFCACTMLLEMIRHHSLV
DVFYAAKTLRNSKPNMVETMEQYRFCYDLALEYLDDLDCLSEIEVR
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcggagtgtttctactgatgctggtcgtcgggatctacgctgatactatggac
caagggccaacagctggctgtacctttgacgatgactctgaccctgggctgtgtgagtac
aagcagggacaggaggacgactttgactggcagctgatgaggacatacaactggccacac
acaaccccagacctgctgcgagggtcgttcatgatggtgaactcgtcccagcatgccgcg
gggcagcgggcccacctcctcctccattcgctgagtgagaacgacacacactgcatccag
ttcagctacttcctgtacagccgtgacggccattcccccggggacctgcagctctacatc
cgggtcaatggggggccgcggggcagcgccgtctggaacgtctccgggtcacacggacgc
cagtggcaccaggtggagctagccgtcagcacattctggcccagcgaataccaggtggtg
tttgaagcatccgtctcagcagaacggcgaggctacatcgccattgacgacatcctgctg
ctcaattacccctgctacaaggttccccacttctctcggctgggggatgtggaggtcaat
gcagggcagaatgccaccttccagtgtgtcgccacgggcaaaactacagagacagaaccc
ttcctactggagcgtcgtaacggtgtggttgtggcggcgtcctttatccagcgtctgagc
cacaagcgtctcatggccaccttccaggtggaggctgagagaggggagcaggacctatat
cgctgcatcacagagtccacccgcggagctgccgtgtctaacttcgccgagctcattgtc
agagtgccccccacccccatcgctcccccccagctgctccgggctggccccacctacctg
atcattcagctcaacaccaactccattgtgggggatggccccgtgatccgccgcgagatc
gagtaccgggccagccaatcaccatggtcggagacgcacggtgtgggctcgctcacctat
aaggtgtggcatctggagccggacacagagtaccgtatcagtgttttactgacccggcca
ggggagggagggacaggggcgcctggaccccccctggtcagcaggaccaagtgtgcagag
ccgatgcgtgcgttgcgaggcctcacagccacagagatccagcctcgtcaactagcctta
cagtgggaacctctgggctacaacctgacgcgctgccacacctactctgtctctctctgc
taccgctactccacgcctgcagggggcagcgcagggaacaacgccacagtgagggagtgt
ctctccgtggagaggaaccaatcacacttcaccctgagggacctgcccccgttccgctcc
gtctacgtccggctggcgctggaaaacccagaaggcaagaaggagaacagagaggtcacc
tttcagaccgaggaggacattcctggtggcatcgccccagagtcactgactttcacccca
ttggacgatttgatctttctgaagtgggaggagcctgtggagcccaatggggtcatcaca
cagtatgagatcagttaccagggcattgagtcatccgacccgggtatcaacgtaccgggc
cctcgccgtactgtctccaagctgaggaacgagacataccacatgttctctggcctacac
cccggcaccacctacctggtgtctgttagagctcgcaccaccaaaggcttcggacagacc
gccctcactgagatcaccaccaacatctccgccccagtgtttgactatgaggacaaccca
gccccactcagtgagtcagagagtaccatcactgtgctgctgagaccagcgctgggcaga
ggagcaccagtcagtacataccaggtggtggtattagaagaggacggttctaggcgggtc
aggaggaggagggagctgggtagcgggtcagactgtttccctgtgccagcgtcccaggtg
gaggcccagtctaaggggacgcctcactactacacggctgagctgcccccctccagtctc
cctaaggccactccattcacagtaggggacaaccacacctataacggctactggaacact
cccctggacccctccaagaactacctagtcttcttccaggctacaagctacttcagaggg
gaaacgagaattaactgcatccggattgcccgtaaagctgcctgtaaggaccataagagg
gccctggaggtgtaccaacatgcagaggacatgggtctgatcctgggggcctgtgctggg
ggactggtggtcctcattctgctgctgggggccattgtcatcatcatcaagaagggcagg
aagaaggtagcgctgaacaaggcagccatgtcgtaccgtcaggagaagaccaggaagcta
ggttctctggactgcagcatgacagagcagagcaccctgcagcaggacaggcacaccgct
aactccttcatggacgcccacacctgcaacacacggaatgaacagaggagttcagtgaac
gagtccagcagcctgttgggtggttccccacgacggcactgccgtaggaagagctctccg
taccacacgggtcaacttcaccccgcggtcagggtggcagacctcctccaacacatcaac
cagatgaagactggagagggatacggtttcaaacaggagtatgagagcttctttgatgga
tgggatgtcaccaagaagaaggacaagactaaagggagacatgacagtttgctggggcat
gatcatcatcgagtcaagctacactccctcctagcagaccccaactctgactatggcaat
gccaactacatagacatccggataaacagggaagggtaccagcgatcaaaccacttcata
gccacccaaggccccaagcaggagatgatctatgacttctggaggatggtgtggcaggag
aattgcttcagtatcgtcatgatcactaaactggtggaggtgggcaggatgaagtgctgt
aagtactggcctgaggacagtgaactctatggagacatcaagatcacacttctgaagacg
gaaacactggcccagtacaccgtccgcacctttgctatggagcggaggggctacccagcc
aaacatgaggtgtgtcagttccacttcacctcctggccagagcatggcgttccctaccac
gccacaggcctgctggccttccttcgccgggtcaaggcctccacaccccccgacgctggg
cccgtggtcgtccactgcagtatgggagcaggcagaacaggctgttacatcgtactggac
gtcatgctggatatggcagagtgtgagggagtggtggacatctacaactgtgttaagacc
ctctgctccagacgcatcaacatgatacagacagaggagcagtatgtgttcatccatgat
gccatcctggaggcctgtctgtgtggagagacagctataccagttattgagtttgctctg
acctataaggagatgctgagggttgactcacagagcaacacctcccagctacgagaggag
ttccagacgttgaactctgtgacccctcacctggacatggaggagtgcagcgtgtccctg
ttgcctaggaaccgcgagaagaaccgtagcatggacgtcctgcctcccgaccgcgccctg
gccttcctggtcaccaccgagggcattgcagagggcagcaactacatcaacgccgctctc
accgacagcttccaccggcccgccgccttcgtggtcacaccgcacccgttaccgggaacc
acagcagacttctggaggctggtctatgactatggatgtacctcggtggtgatgctcaac
cagatcaaccagtccaactctgcctgggtgagaagaggggagccgtgtctacagtactgg
ccagagcctgggctgcagcagtttggaccaatgacagtggagctcctgtccatgacggct
gatgatgacatcatcattcgtctgttccgggttcagaacatcatgcgggatcccactgat
cctaccaatcagagctgtccagcaacaggaacagggagggaggatgatatacactttccc
agcaagctccaggaaggtcagctggtggttcgtcatttccagttcctgcgctggtctcca
taccgtgacgtcccagactctaagaaggctttcctaagcctgttggcccaggtccacaac
tggcagagggagtgtggagagggacgtaccatcatccactgtcttaacggtggtggtagg
agcggtacattctgtgcttgtaccatgctgctagagatgatccgtcatcacagcctggtg
gatgtcttctacgctgccaagacactacgcaactccaaacccaacatggtggagaccatg
gagcagtaccggttctgctatgacctggccttggagtacctggacgacttggactgcctg
agtgagatagaagtgagataa
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