Coregonus clupeaformis (lake whitefish): 121586559
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Entry
121586559 CDS
T08357
Name
(RefSeq) DNA topoisomerase 2-beta-like isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cclu03032
]
121586559
03036 Chromosome and associated proteins [BR:
cclu03036
]
121586559
Enzymes [BR:
cclu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
121586559
DNA replication proteins [BR:
cclu03032
]
Eukaryotic type
DNA Topoisomerases
121586559
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
121586559
Centrosome formation proteins
Centriole proteins
121586559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
HATPase_c
Toprim
Motif
Other DBs
NCBI-GeneID:
121586559
NCBI-ProteinID:
XP_041759266
LinkDB
All DBs
Position
17:complement(9520573..9562765)
Genome browser
AA seq
1656 aa
AA seq
DB search
MSNGAAGSGGLTWVTLFDKKNAAKKREEEAAAAAAAANGRGDGGKAEGGGGGAKKKGGDK
MSVERVYQKKTQLEHILLRPDTYIGSVEPVTQQMWVFDEDLGMNLREITYVPGLYKIFDE
ILVNAADNKQRDKSMSTIKISIDPESNTITIWNNGKGIPVVEHKDEKMYVPALIFGHLLT
SSNYDDEQKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWQNNMGKTSDPKIK
FFDGDDFTCVTFQPDLSKFKMEKLDKDIVALLTKRAYDIAGSCKGVKVMLNGKKLPVTGF
RSYVDLYVKDKLDEVGVALKVVNESVNERWEVCLTMSEKGFQQISFVNSIATTKGGRHID
YVVDQIVAKLIEVVKKKNKAGVSVKPFQVKNHIWVFVNALIENPTFDSQTKENMTLQTKS
FGSKCPLSEKFIRAATNCGIVESILNWVKFKAQTQLNKKCSSVKHSKIKGIPKLDDANDA
GGKHSSECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREATHKQIMENAEI
NNIIKIVGLQYKKSYEDPESLRSLRYGKIMIMTDQDQDGSHIKGLLINFFHHNWPSLLKH
TFLEEFITPIVKVNKNKQEHAFYSIPEFDEWKKQTVNFKTWHIKYYKGLGTSTSKEAKEY
FADMEKHRIMFRYAGTEDDAAITLAFSKKKTDDRKEWLTNFMEDRRQRRMHGLPEQYLYG
TQAKHLSYNDFINKELILFSNSDNERSIPSLVDGLKPGQRKVLFTCMKRNDKREVKVAQL
AGSVAEMSAYHHGEQSLLMTIVNLAQNFVGSNNVNILQPLGQFGTRINGGKDAASPRYIF
TMLSPLAKMLFPAVDSSLLKFLFDDNQKVEPEWYIPILPMVLVNGAEGIGTGWACKIPNY
DHREIVNNLYRMLNMQDPLPMLPSYKNFKGVIHELGQNQYMVSGEISVLDKNTIEITELP
VRTWTQAYKESVLEPMLQGTEKTPALINDYKEYHTDQTVKFVVRMSEEKLAQAEAAGLHK
VFKLQSSLTCNSMVLFDHMGCLKRYDSVQDILKEFFELRLHYYKLRKDWLVGSLGAEASK
LSNQARFVLEKIEGKITIENKSKRELIRMLVQKGFESDPVAAWTKAQEKALEEDDRDGND
SDSSVDSGSSSGPNFNYILNMPLWCLSKEKVDELLRQRDIKKGELNELQRKSPEDLWKED
LAVFIEELDKIEAQEQADMSAGKGTKLVKGKVGKPKVKKLHLEETLPSPYGRRVVPTITQ
AMKTDASKKMIKKKKGDADLVMKLEFDDEMGVLGSDGGTGENSLNSSSNTPAPAPASAKP
KAPRIKREKKEPGAPRARKPPALKGASGKKVKKRNPWSEDESKSESDLEDSEPVVIPRDI
KSQRASAAKPKYTFDFSEEEDGGEEEEEDDDDADAASSPARPCKDDFTASSETKDRYSDD
DEDDEDIFPPPKQTTINISPAKEKEPESIFSPSKSAFSSEKSNDSDDLNLDSDGEDKAFS
SYYSSSAFDKPVPAKKAAKNATPKPRKAPAPKAPPKQKLDTSVWDSDSDTDSKKPAPALK
GKGGGRKRKQSGSEEDDFSPKKAPGKAPKSPASRKPSKKAAAASPPMSDDDDDVDSNRFS
QSSVASRERPGRGRAKKEVKYFVESGSDDDQYDMFD
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacggcgcagcaggaagcgggggtctgacttgggtgaccctctttgataagaag
aatgctgccaaaaagagggaggaggaggcagcggctgccgcggcggctgcgaacggcagg
ggtgatgggggcaaggcggagggaggaggtggaggagccaagaagaagggaggagataag
atgtcagtggagagggtgtaccagaagaagacccagctggagcacattctactgaggcca
gacacctacatcggctctgtggaacctgtcacccagcaaatgtgggttttcgatgaagat
cttgggatgaatctcagagaaatcacttatgtccctggattatacaaaatctttgatgaa
attcttgtcaacgcagccgacaacaaacagcgggataagagcatgtcgaccataaagatc
tccattgatcctgagtccaacaccatcaccatctggaacaatggtaaaggcatccctgtg
gtggaacacaaagatgagaagatgtacgttcccgctctcatcttcggacacctcctcacc
tccagtaactacgacgacgagcagaagaaagtcacaggtggaaggaacgggtacggtgct
aaactctgcaacatcttcagcacaaagttcacagtggaaaccgcctgcaaggagtacaaa
cacagcttcaaacagacttggcagaacaacatggggaagacgagcgaccccaagatcaag
ttctttgacggggacgacttcacgtgcgtgaccttccagccggacctgtccaagttcaag
atggagaagctggacaaggacatcgtggctttgctcaccaagagggcctacgacatcgct
ggctcttgcaagggcgtcaaagtcatgctcaacgggaagaaactccctgtgacagggttc
cgcagctatgtggacctgtacgtgaaggacaagctggacgaggtgggcgtggccctgaag
gtggtcaacgagtcggtcaacgagcgctgggaggtgtgtctcaccatgagtgagaaggga
ttccaacagatcagcttcgtcaacagtatcgccaccaccaagggtggcagacacattgat
tacgtggtggaccagatcgtagccaagctgatagaagtggtgaagaagaagaacaaagct
ggtgtctcagtcaaacccttccaggtgaagaaccacatctgggtgtttgtgaatgcgttg
atcgagaacccgacctttgactcccagaccaaggagaacatgaccctccagaccaagagc
tttggttctaagtgccctctgtctgagaagttcatcagagcggcgaccaactgtggcatc
gtggagagtatcctgaactgggtgaagttcaaggcccagacacaactcaacaagaagtgt
tcttcagtgaagcacagcaagattaaaggcatccccaagctggacgacgccaacgatgcc
ggtggtaaacactcgtcagaatgcactctgatcctgactgagggtgactcggccaagtcc
ctggccgtctccggccttggcgtcattgggcgagatcgctatggtgtcttcccactacga
ggaaagatcctgaacgtacgagaggccacacacaaacagatcatggagaacgcagagatc
aacaacatcatcaagattgtgggtctgcagtacaagaagagctacgaggacccagagtct
ctgagatccctacgctacggcaagatcatgatcatgaccgatcaggatcaagatggctcc
catatcaagggtttgctcatcaacttcttccatcacaactggccatccctgctcaaacac
accttcctggaggagttcatcacgcctatcgtcaaagtgaacaagaataaacaggagcat
gctttctacagcattccagagtttgacgaatggaagaaacagacagtcaactttaaaacc
tggcatataaagtactacaaaggtttgggtaccagtacaagcaaggaggccaaggagtac
tttgcagacatggagaaacaccggatcatgttcagatacgccgggacagaggacgatgct
gccatcacactggcattcagtaagaagaagactgacgacaggaaggagtggctcaccaac
ttcatggaggacaggagacagaggaggatgcacggcctgccagagcaatacctgtacggc
acgcaggcgaaacacctctcctacaacgacttcatcaacaaagaactcatcctcttctcc
aactctgacaacgagagatccatcccatccttagtcgacggtctgaagccaggtcagagg
aaggtactgttcacctgtatgaagaggaatgataagcgggaggtgaaggtggctcagctg
gctggttcagtagcagagatgtctgcctaccatcacggagagcaatccctgttgatgacg
attgtgaacttggcccagaactttgtgggcagcaacaacgtgaacatcctgcagccgctg
ggtcagtttggtacccgcatcaacgggggcaaggacgctgccagcccccgttacatcttc
accatgctcagtcccctggccaagatgttgttcccagcggtagactccagcctgctgaag
ttcctgttcgatgacaaccagaaggtggagccagagtggtacatccccatcctccctatg
gtgctggtgaacggggccgagggcatcgggacgggctgggcctgcaagatccccaactac
gaccatagagagatagtcaacaacctctaccgcatgcttaacatgcaggaccctctgccc
atgctgcccagctataagaactttaaaggagtgatccatgagttgggccagaaccagtac
atggtcagtggagagatctctgtcctggacaagaacaccattgagatcactgagctgccc
gttcgcacctggacacaggcctacaaggagtctgtactagagcccatgctccaggggaca
gagaagactccagctctgatcaatgactataaggagtaccacacggaccaaaccgtcaag
tttgttgtccgcatgtcagaggagaagttggcccaggcagaggctgcaggactacataaa
gtcttcaagctacagtccagcctcacctgcaactccatggtgttgtttgaccacatgggc
tgtctgaagaggtatgattcggtccaggacattctcaaggagttctttgagctgcggttg
cactactacaagctgaggaaggactggctagtggggagcctgggggcggaggcttccaaa
ctgtccaatcaggcacgatttgtgctggagaagattgaaggaaagatcacaatcgagaac
aagtctaagagggaactgatcaggatgctggtgcagaaaggctttgagtctgaccccgtt
gcggcatggaccaaggcacaggaaaaggctctggaggaggacgatcgtgatggtaacgac
agtgacagctctgtggactctgggtcgtcgtcgggaccaaacttcaactacatcctcaac
atgcctctgtggtgcctgtccaaggagaaggtggacgagctgctccgacagagagacatc
aagaaaggagagttgaatgagctgcagaggaagtctccagaagacctgtggaaggaggac
ctggctgtcttcattgaagaactggataaaatcgaggcccaggagcaagcagacatgagt
gcaggtaaaggtaccaagctggtgaagggcaaggtgggcaagcccaaggttaagaaactc
cacctggaggagacgttaccctcgccatacggccgcagggtcgtacccaccatcacacag
gccatgaagactgacgcctccaagaagatgatcaagaagaagaagggtgatgcggacctg
gtgatgaaactggagtttgatgatgagatgggagtgctggggtcagacggaggaacaggg
gagaactccctcaactcatcctctaatacaccagccccggccccggcctcagccaagccc
aaggcccctcggatcaaacgggagaagaaggagccaggtgctcccagagccaggaaaccc
ccagcactcaaaggagcatctggtaagaaggtgaagaagcgtaacccctggtcggaggac
gagtccaaatcagagagcgacctggaggacagtgaacctgtggtcatcccccgagacatc
aagtcacaacgggcctcagcggccaagcccaagtacacctttgatttcagtgaggaagag
gatggaggagaggaagaggaggaggatgatgatgatgctgatgctgcgtcctcaccagcc
cggccctgcaaagacgacttcaccgcctcctccgagactaaagaccgatacagcgacgat
gacgaggatgatgaagatatcttcccaccgcccaaacagaccaccatcaacatctcacca
gcgaaggagaaggaaccagagagtatattctccccctccaaatcagccttctcctctgaa
aagagcaatgacagtgatgatctgaatttggacagtgacggggaagacaaggccttctcc
tcatactacagcagctctgctttcgacaaacctgtcccagctaagaaagcagctaagaat
gcaactcccaaacccaggaaagcaccagcacccaaagcgccacccaaacagaagctggac
acgtccgtctgggactcggactccgataccgactccaagaagcctgcaccagcactcaaa
ggtaaaggcggagggaggaagaggaagcagtctggatctgaagaggatgatttcagtccc
aagaaagctcctgggaaagcacccaaatcccccgccagcaggaagccatcaaagaaagca
gccgcggcctcgccccccatgtcagatgatgatgatgacgtggactccaaccgtttcagc
caatccagcgtggcgtcccgagaacgaccgggcagaggcagggccaagaaggaagtgaag
tactttgttgagtcagggtcagacgacgatcagtacgacatgttcgactag
DBGET
integrated database retrieval system
