KEGG   Coregonus clupeaformis (lake whitefish): 121586613
Entry
121586613         CDS       T08357                                 
Symbol
sdc3
Name
(RefSeq) syndecan-3
  KO
K16337  syndecan 3
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04514  Cell adhesion molecules
cclu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    121586613 (sdc3)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121586613 (sdc3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:cclu00535]
    121586613 (sdc3)
Proteoglycans [BR:cclu00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   121586613 (sdc3)
SSDB
Motif
Pfam: Syndecan
Other DBs
NCBI-GeneID: 121586613
NCBI-ProteinID: XP_045082514
LinkDB
Position
17:45904711..45943599
AA seq 405 aa
MKLRRCLMTILAALLAHSALGQTWDTEGSSRDEFYDDEDLFSGSGSGFPEMKVNPTAVGV
SFTTEEPLPLSTTQATGPAPSAPPAAEPNPNPDALPTPLPTEGEGESGVEWERGRERERE
RVREMRERERERQREIERERERERERERARAAQTTISPHGAAAVPMVTTSTATPLAESAA
PSSGVEDLVTTEEDEDVYLSPDPTTSMPMETTTEEEEEEEVTTAETETTPLPETTAPPIT
TGPALTERSSSAPFKPRVLVTTPTKAAPTEMSTRPQQPSTTMNNELGVNGPSGDFEIREE
DRRQGNEVVGRGRGMETGAEPDLIGNTINTGSSAAQLPQKNILERKEVLIAVIVGGVVGA
LFAAFLVMLLVYRMKKKDEGSYTLEEPKQATVTYQKADKQEEFYA
NT seq 1218 nt   +upstreamnt  +downstreamnt
atgaagctgcggcggtgtctgatgactatccttgcggcgctgctcgctcactccgcgctg
ggtcagacctgggatacagaaggttcttctagagatgagttctatgatgatgaagacctc
ttctcaggctccggatctggctttccagagatgaaggtcaaccctacagcggtgggtgtg
tctttcaccactgaggagcccctccccctttccaccacccaggccactggccccgccccc
tcggccccacctgcagccgagcccaatcccaaccctgacgctctccccaccccactaccc
actgagggagagggggagagtggggtagagtgggagagagggagggagagggaaagagag
agagtaagggagatgagagaacgagaaagagagaggcaacgggaaatagagagggaacga
gaaagagaacgtgaaagagaaagagcgagagccgcccagactaccatctcaccccacggc
gctgcggctgttcccatggtgaccaccagcacagcgacgcctctggcggagagcgcggca
ccctctagtggtgtggaggacctggtcaccacagaagaggacgaggatgtctacctgtcc
ccagaccccaccaccagtatgcctatggagaccactacggaagaagaagaagaggaagaa
gtgaccactgcagagacagagaccacacccctcccagagacaacagctccacccattacg
actggcccagccttaactgagaggtctagctccgcccccttcaagcccagggttctggtg
accacgcctactaaagccgcgcccacagagatgagcacacgcccacagcagccttctacg
acaatgaataatgagttaggggttaatggacccagtggagactttgagatccgggaggag
gaccgtcgccagggcaacgaggttgttgggcgtggccgtggcatggagactggggcagaa
cctgatctgattggcaacacaattaacacaggaagttctgccgctcaacttcctcagaag
aacatcctggagaggaaggaggttctgatagcggtgatagtgggaggcgtggtgggggcc
ctgttcgcagcgttcctggtcatgctgctggtgtacaggatgaagaagaaggatgaaggc
agctacacgctggaggaacccaagcaggccactgtcacctaccagaaagctgacaaacag
gaggagttctacgcataa

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