Coregonus clupeaformis (lake whitefish): 121586624
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Entry
121586624 CDS
T08357
Symbol
clasp2
Name
(RefSeq) CLIP-associating protein 2 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121586624 (clasp2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121586624 (clasp2)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
121586624 (clasp2)
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
121586624 (clasp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
TOR1L1_N
Cnd1
ParcG
HEAT_DAAF5
IFRD
MMS19_C
TAN
Motif
Other DBs
NCBI-GeneID:
121586624
NCBI-ProteinID:
XP_041759402
LinkDB
All DBs
Position
17:45642439..45707260
Genome browser
AA seq
1555 aa
AA seq
DB search
MEEHDNMDYFYQQVLQKDVTRRLQVGQDLIDYLNDPQRSTDVEQDKPRLDKTVDELTGWV
NSSNYKVALLGIDIAGAFVDRLGERFRGYLGTVVPALVDRLGDSKDQVRDQSQTVILRCM
EVTASPMYVWERLLPGFKHKNFRSREGVCLVLCATLNTYGAQPLSLSKIVPYLCTLTGDQ
NPQVREAATASLVDVYRHIGERVRADLGKRGLPATRLQTIYGRFDEALNSGNMALSPSHD
HSFEDDADSTDGNRAQAAFKVPKIPKKPAESSTARRPSATGSKIGGASKDGAGGIDEEDF
IKAFTDVPTVQIYSSRDLEDNLNKIREICSDDKHDWDQRAAAMKKIRSLIVAGATEYECF
FQHLRLLDGAFKLSAKDLRSQVVREACITVAHLSTVLGNKFDHGAEGILPILFNLIPNCA
KVMATSGVSAIRFIIRHTHVPRLIPLITSNCTCKSVAVRRKCFDFLDLLLQEWQTQTLER
HTAVMVASIKKGIADADAEARVEARKAYWGLRNHFPGEADTLFNSLEPSYQRSLQSSLRN
AGSVASLPQSDRSSSSSQESLNRPLSSKWSAAPGRVPAGHKGGASPGSLQRSRSDVDVNA
ATVAKQRHIGQVGAGRLTPGSYSSLDDASDKMDGARSVNGRLRTKQPLTTATSVSQVDSR
GRTRTKMVSQSQRSDESDCTPGSQSATPIGAGSRSGSPGRVLTSTALSTLGSGAQRVLAG
AGGAGTGGRRSRIPRSQGCSRDSSPTRLSVAPSSISSIYNGASRGARGSRIPRPSMSQGC
SREASRESSRDTSPVRSFTPLASRHYSRSTGALHTADALGAAGSGYSISQSSRLSSSVSA
MRVLNTGSDVEEALADALLLGDMRSKKKPARRRYENYGMYSDDDANSDASSACSERSYSS
RNGGVIPTYMRQTEDVAEVLNRCASANWSERKEGLLGLQALLKNQRTLSRVELKRLCEIF
TRMFADPHSKRESGSRVYGTAESGISSASFKRVFSMFLETLVDFVLVHKEDLQDWLFVLL
TQLLKKMGADLLGSVQAKVQRALDITRESFPNDLQFTILMRFTVDQTQTPNLKVKVAILK
YIETLTLQMEPQDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQSVLISLFQLNTPEFTM
LLAALPKTFQDGATKLLQNHLRNTGNAAQAPIGSPLTRHTPRSPASWSSPLTSPTNTSQN
TSLPSAFEYDTENMNSEDIYSSLRGVTEAIQNFSVRSQEDMNEPVRRREGEEGGTAGADQ
VDGGRTALDNKTSLLNTPLLSSSPRGSRDPFTDSPFKHSVIDTSLDESDQQTDDSSIDQS
ELVSELLKELSNHNERVEERKAALCELLKLIRGNTLQVSWDEHFKTILLLLLETLGDREH
VIRALALRVLREILSRQPWRFKNYAELTIMKALEAHKDPQKEVVRAAEETAAMLASSISP
DQCIKVLCPIIQSADYPINLAAIKMQTKVIERVPHDGLVSMLPEIVPGLIQGYDNSESSV
RKACVFCLVALYAVIGEELKPHLNQLSVSKLKLLNVYIKRAQSGSSGGEPPADNL
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacatgacaacatggattatttttaccagcaggtcctgcagaaagacgttacc
cgcaggctgcaggtcgggcaggacctcatagactacctgaacgacccgcagaggtccacc
gatgtggagcaagacaaaccacggctggataaaaccgtagacgagctgacgggatgggta
aactccagcaactacaaggtggcgttgttggggatagacattgccggggcgttcgtcgat
cgcttgggggagcgcttcagaggatacctgggaacagtggtcccagcattagtggacagg
ttgggggacagtaaggaccaggtcagagaccagagtcagactgtcatcctccgctgtatg
gaagttacagcatcgcctatgtatgtgtgggagaggttgcttcctggttttaaacataag
aatttccgcagcagagagggggtgtgtctggttctctgtgccaccctcaacacgtatggt
gctcagcctttgagtctcagtaagatcgttccgtacctctgcactctgactggagaccag
aacccacaggtgcgtgaggctgccacagcatcgctggtggatgtgtatcgccacatagga
gagagagtcagagctgacctgggaaagagaggcctgcctgccacacggttacagacaata
tacgggcgttttgatgaagcgttgaattctgggaacatggcgctcagccccagtcacgac
catagttttgaggatgatgcggacagtacggatgggaaccgtgctcaggctgccttcaaa
gtccccaaaatccccaaaaagccggcggagtcttctactgcacgcagacccagcgctaca
ggatccaagatcggcggtgcgtctaaggatggagccggaggcatcgatgaggaagacttc
atcaaagccttcactgatgtccccacagtacagatctactcatctcgtgacctggaggat
aacctgaataagatcagagagatctgttctgatgacaaacatgactgggaccagagagcc
gccgcaatgaagaagatccgctcactgattgttgccggggcaactgagtatgagtgtttc
ttccaacacctgaggctgttggacggagcgttcaaactgtcagctaaagacctccgatca
caggtggtacgagaggcctgcatcactgtggcccacctgtcgacagtgttgggtaataag
tttgaccatggagccgagggcattcttcctatcctgttcaacctcatccctaactgtgcc
aaggttatggctacgtcaggggtgtctgctatacgctttatcatacggcacacacacgtt
cccagactcattcccctgatcaccagtaactgcacctgcaagtctgtggccgtcagaagg
aaatgttttgacttcttggacctgctgctgcaggagtggcagacccagactctggagaga
catacagcagtgatggtagcgagcattaagaaggggatcgcagatgccgacgcagaggcc
agagtagaggcccgcaaggcatactggggtctgaggaaccattttccgggagaggcggac
actctgttcaactcgttagaaccttcctatcagaggagcctccagtcgtcactcaggaat
gccgggagcgtggcgtcgcttcctcagagcgaccgctcctcttcctcttcacaggagagc
ctcaatcgtcctctgtcgtctaaatggtcagctgctcctggaagagtcccagcgggtcat
aagggtggggcgtcgccaggctccctgcagcgttcccgtagcgatgtggatgttaatgca
gcaacagttgctaagcagcggcacatcgggcaggtgggggcggggagactgacccccggc
tcctactcgtcattggatgatgcctctgataaaatggatggggccaggtcagtcaatgga
cgtctgaggaccaagcagcctctcaccacggcaaccagcgtcagccaggtggactcccgg
ggacgcacccgcaccaagatggtgtcccagtcacaacgttccgacgaatcagattgcacg
ccaggatctcagtctgctacccccattggtgccggcagtcggagtggttccccgggccgc
gtcctgaccagtacagctctgagtacgcttggttccggagcccagagggtcctagctggg
gccggaggggctgggacaggagggagacgtagccgcatcccccgcagccagggctgctca
cgagactcctcccctacacgcctgtctgttgctccctccagtattagttccatctacaac
ggagcaagcagaggagctcggggcagtcgtatccctcggcccagtatgagtcagggctgc
agcagggaggccagcagagagagcagcagagacaccagccctgtacgctcctttacaccc
ctggcgtcgcggcactactctcgctccactggagctctccacaccgccgatgctttaggg
gccgcagggtcagggtacagtatcagtcagtccagtcgtctgtcctcatccgtcagcgcc
atgagagtcctcaacacaggatctgatgtagaagaggccctcgctgacgccctgctgttg
ggagacatgagatccaagaagaagccagcacggcggcgctatgagaactatgggatgtat
tcggatgatgacgctaacagtgatgcgtccagcgcctgctcagagcgctcctatagctcc
aggaacggaggagtcatccctacgtacatgagacagactgaagacgtggccgaggtgttg
aaccgctgtgccagtgctaactggtcggagaggaaggaagggctactgggtctacaggct
ctactgaagaaccagcgcaccctcagtcgtgtggagttgaagaggttgtgtgagatcttc
accaggatgtttgcagacccccatagtaagcgagaatccggatctagggtctatggaacg
gcagaatccggtataagctcagcctccttcaagagagtgttcagtatgttcttagagacc
ctagtggactttgtcctggtgcataaagaagacctgcaggactggctgttcgtcctgctc
acccagctgctgaagaagatgggagctgacctactgggatcagtacaggccaaggtccag
agagcactggacatcacacgagagtctttccccaatgacctccagttcactatcctcatg
aggttcactgtggaccagactcagacacccaacctcaaggtgaaggtggccattctgaag
tacattgagaccttgaccctgcagatggagcctcaggactttgtcaactccagtgagacg
cgcctggctgtgtctcgcatcatcacctggaccacagagcccaagagctccgacgtcagg
aaggctgcccagtcagtgttgatctcgttgttccagttgaacactccagagttcaccatg
ctgctggcagctctgcccaagaccttccaggatggcgccaccaaactgctacagaaccac
ctgaggaacacaggcaacgctgcacaggccccgataggaagccctctgacacgccacacc
ccccgctctcctgccagctggtccagccccctcacctctcctaccaacacatcacagaac
acatccttacccagtgcgtttgaatacgacacagagaacatgaactcagaggacatctac
agtagtctgagaggagttacagaggccatccagaacttctccgtccgtagccaggaagac
atgaatgaaccggtcagacggagagaaggagaggagggtggtactgctggtgctgaccag
gtggatggaggtcgtactgctctggacaacaagacgtctctcctcaacacccccctgctc
tcctcttctccccgggggtcccgtgaccccttcacagactcccccttcaaacacagcgtc
atagatacttcactagatgaatcagaccagcaaactgacgacagcagcattgaccaatcg
gagctagtgtctgagctgttgaaggagctgtccaatcacaatgagcgtgtggaggagagg
aaggcagcgctttgtgagctcttgaagctgattcgtggaaacaccctgcaggtctcctgg
gatgaacacttcaaaaccatcctcctgttactactggagacgctgggggacagagagcat
gtgattagggcattagctctgcgtgttctaagggagattctgagccgccagccctggagg
tttaagaactatgctgaactcaccatcatgaaggccctggaggcacacaaggacccacag
aaagaggtggtgcgagcggcagaggagactgcagccatgctggcgtcgtccatcagtcca
gaccagtgtatcaaggtgttgtgtcccatcatccagtcagctgactaccccatcaacctg
gctgccatcaagatgcagactaaagttatagagcgggtcccccacgatggactagtcagc
atgctgcctgagatagtccccggactcatacagggttatgacaactctgagagcagtgtg
aggaaggcctgtgtattctgtctggtggccctctacgcagtcataggggaggagctaaaa
cctcacctcaaccaactgtctgtaagcaaattgaagttgttgaatgtgtacatcaagcgt
gcccagtccggctccagtggtggtgagcccccagcagacaacctatag
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