KEGG   Coregonus clupeaformis (lake whitefish): 121586639
Entry
121586639         CDS       T08357                                 
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
  KO
K17925  sorting nexin-13
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cclu04990]
    121586639 (snx13)
Domain-containing proteins not elsewhere classified [BR:cclu04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   121586639 (snx13)
SSDB
Motif
Pfam: PXA Nexin_C RGS PX Rep3_C DUF6395
Other DBs
NCBI-GeneID: 121586639
NCBI-ProteinID: XP_041759458
LinkDB
Position
17:49003908..49024616
AA seq 957 aa
MFAEASLSVWGWGGLGVVLFLITFGPFAIFYLAFYICCVVGGGFAVTLLFGKTNSERHLE
KCEHSYLPATQTGILKTLDEMRLAPKPIKIDRRLTGSNYIDEPLQQVIQFALRDYIQYWY
YTLSEDESFLLEIRQTVQNALVQFSTRSKDVDWQPYFTTRLVDDFATHLRVFRKAQDRLE
RRDDNKQRELSEEMVESFFEAEVEMERNICRDVVCTSLKDEEGFLRDLCEVLLYLLLPPG
DFHNKNMRYFLREILARGVLLPLVNQLSDPDYINQFVIWMIRDSSCNYEAFMNILKLTDR
VSELEAVKDKALEELQYLRSLDTAGDDINVIKNQINSLLFVKKVCETRIQRLKSGKEVDA
LKLAANFGKLCIIPLEHILVHNIALQFFMDYMQAAGAQAELFFWLTVEGYRVTAQQQLEV
MEGWQKDGKKGGSTKGLLKAAALGVYEQYLSDKASPRVQVDEMSVVKLREKLQKDGDPTP
EIFDDIQRKVYDMMLRDERYYPSFRQSPLYIRMLAELDMLKEPSYRGSDDGDGESFNGSP
TGSINLSLDDLSNSCNDDNIQLHAFISDTGVCNDHGKTYALYAITVCRRNHDGSEDSWKT
YRRYSDFHDFHMRITEQVKFENLTSILKLPGKKTFNNMDRDFLEKRKKDLNAYLQLLLNP
EMVKACPTLVPYVYDFLENKQYSKGKGDFARKMDTFVNPLRSSMRNVSNAVKRLPDSLAE
GMNTAADNMGRMSEKLGQDIKQSMFKVPPLLPKSDIDPEHCRVSAQLDDNVDDNIPLRVM
LLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDFMTAPEQVADYVKK
FRDSYWPNGILAESPPRRDKNIRMRTRVAAKTNLLGIMPDELKHIIGADTTRKGILRVFD
MFQHGPMNRRLVYVLLEGFLETMFPQYKFPELFVKLHSRSPRTARYTQKLKSTSLKR
NT seq 2874 nt   +upstreamnt  +downstreamnt
atgtttgcagaggccagtctgtctgtgtggggatgggggggtctaggagtggtgctgttc
ctcatcactttcggacccttcgctatcttctacctggccttctatatctgctgcgttgta
ggaggtggttttgcggtcactctgttgtttgggaagactaactcagagagacatctagag
aagtgtgaacactcctacctgccggccacgcaaacgggtatactgaagacattggatgag
atgaggttggctccgaagcctataaagatagacagaagactgactggctccaactacata
gacgagcctctgcaacaggtcatccagtttgcattgagagattatattcagtattggtat
tacactctgagtgaggatgagtctttcctgctggaaatcagacagactgtccagaacgct
ttggtccagttctctacacggtctaaagacgtggactggcagccttatttcaccaccaga
ctggtggatgacttcgctactcacctccgagtcttcagaaaggcccaggacagactggag
cgcagggatgacaataaacagagggaattgtcggaggagatggtggagtcattctttgag
gcggaggtagagatggagaggaacatctgtagagacgtggtctgcacctccctgaaggat
gaagaagggttcctgagggatctgtgtgaggtgctgctctacctcttactacctcctgga
gacttccacaacaagaacatgagatacttcctcagggagattctggcgcgaggcgttctc
cttcccctggtcaaccagctgagtgatcctgattacatcaaccagtttgttatctggatg
atccgggactctagctgtaactacgaggcgtttatgaacatcttgaagctgacagacaga
gtgtctgagctggaggctgttaaagacaaggccctggaggaactgcagtacctacgatca
ctggacacagcaggagacgatatcaatgtgataaagaatcagatcaacagtctgttgttt
gtgaagaaggtctgtgagaccaggatacagaggctgaagtctgggaaggaggtggatgcg
ctgaaactagctgctaactttggcaagctgtgcatcataccgctggaacacatccttgta
cacaacatcgccctgcagttctttatggactacatgcaggcggctggggcccaggcagag
ctgttcttctggctgacagtggagggctacagagtaacagcccagcaacaactagaggtg
atggagggatggcagaaggatggaaagaagggaggatccactaaaggactgctgaaggct
gcagcactaggggtctatgaacagtacctgtctgataaggcgtcccccagggtgcaggta
gatgagatgtctgtagtcaaactgagagagaagctacagaaggacggcgaccccacgcca
gagatattcgacgacatccagagaaaggtgtatgacatgatgcttcgtgatgagaggtac
tacccgtcgttcagacagagtcccctctacatcaggatgttagctgaactggacatgctc
aaagaaccctcttatagaggatcagatgacggagatggagaatcgttcaatggttctcca
acaggaagcattaatctatctctggatgacctttcgaattcctgcaatgacgacaatata
cagctacacgccttcatctctgatacaggggtgtgtaacgaccacggcaagacctacgcc
ctctacgccatcaccgtgtgccgccgtaaccacgacggcagcgaggactcctggaaaacc
taccgccgctactctgacttccacgacttccatatgaggatcacggagcaggtaaagttt
gagaacttgacgtcgatcctgaagctgccggggaagaagacgttcaacaacatggacaga
gacttcctggagaagagaaaaaaagacctgaacgcatacctacagctgctgctgaatcca
gagatggtgaaggcctgtcctactctggtcccctatgtctacgacttcctggagaataag
cagtacagcaagggcaagggagacttcgcacgcaagatggatacgtttgtgaacccgctg
cgtagctcgatgcgtaacgtgtccaacgcagtgaagagactgccagacagtctggctgaa
gggatgaacactgctgctgacaacatgggacgcatgtcagagaaactgggacaggacatc
aaacagtccatgttcaaggtgcctccactgctccccaagtctgacattgacccagagcac
tgccgagtctcggcccagctggacgacaatgtggatgataacatccccctgcgtgtgatg
ctgctgctgatggatgaggtgtttgacctgaaggagaggaaccagtggctccgcaggaac
atcaagaaccttctgcagcaactcatcagagccacatacggagacactatcaacaggaag
attgttgatcatgtggacttcatgacagctccagaacaggtggcagactacgtaaagaag
ttcagggattcatactggcccaatggaatcctagcagagtctccaccccgccgggacaag
aacatccgcatgaggacacgggtcgccgccaagaccaacctattgggaatcatgccagat
gagttgaagcacatcatcggggcggatacgactcgtaaaggcatccttcgtgtgtttgac
atgttccaacatggaccaatgaatcgtcggctggtctacgtgctcctagaagggttcctg
gagaccatgttccctcagtacaagttcccagagctgtttgtcaaactgcactcccgttcg
ccacgcacagccagatacacacagaaactcaagagcacctccctgaagaggtga

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