Coregonus clupeaformis (lake whitefish): 121586639
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Entry
121586639 CDS
T08357
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121586639 (snx13)
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
121586639 (snx13)
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
RGS
PX
Rep3_C
DUF6395
Motif
Other DBs
NCBI-GeneID:
121586639
NCBI-ProteinID:
XP_041759458
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All DBs
Position
17:49003908..49024616
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AA seq
957 aa
AA seq
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MFAEASLSVWGWGGLGVVLFLITFGPFAIFYLAFYICCVVGGGFAVTLLFGKTNSERHLE
KCEHSYLPATQTGILKTLDEMRLAPKPIKIDRRLTGSNYIDEPLQQVIQFALRDYIQYWY
YTLSEDESFLLEIRQTVQNALVQFSTRSKDVDWQPYFTTRLVDDFATHLRVFRKAQDRLE
RRDDNKQRELSEEMVESFFEAEVEMERNICRDVVCTSLKDEEGFLRDLCEVLLYLLLPPG
DFHNKNMRYFLREILARGVLLPLVNQLSDPDYINQFVIWMIRDSSCNYEAFMNILKLTDR
VSELEAVKDKALEELQYLRSLDTAGDDINVIKNQINSLLFVKKVCETRIQRLKSGKEVDA
LKLAANFGKLCIIPLEHILVHNIALQFFMDYMQAAGAQAELFFWLTVEGYRVTAQQQLEV
MEGWQKDGKKGGSTKGLLKAAALGVYEQYLSDKASPRVQVDEMSVVKLREKLQKDGDPTP
EIFDDIQRKVYDMMLRDERYYPSFRQSPLYIRMLAELDMLKEPSYRGSDDGDGESFNGSP
TGSINLSLDDLSNSCNDDNIQLHAFISDTGVCNDHGKTYALYAITVCRRNHDGSEDSWKT
YRRYSDFHDFHMRITEQVKFENLTSILKLPGKKTFNNMDRDFLEKRKKDLNAYLQLLLNP
EMVKACPTLVPYVYDFLENKQYSKGKGDFARKMDTFVNPLRSSMRNVSNAVKRLPDSLAE
GMNTAADNMGRMSEKLGQDIKQSMFKVPPLLPKSDIDPEHCRVSAQLDDNVDDNIPLRVM
LLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDFMTAPEQVADYVKK
FRDSYWPNGILAESPPRRDKNIRMRTRVAAKTNLLGIMPDELKHIIGADTTRKGILRVFD
MFQHGPMNRRLVYVLLEGFLETMFPQYKFPELFVKLHSRSPRTARYTQKLKSTSLKR
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagaggccagtctgtctgtgtggggatgggggggtctaggagtggtgctgttc
ctcatcactttcggacccttcgctatcttctacctggccttctatatctgctgcgttgta
ggaggtggttttgcggtcactctgttgtttgggaagactaactcagagagacatctagag
aagtgtgaacactcctacctgccggccacgcaaacgggtatactgaagacattggatgag
atgaggttggctccgaagcctataaagatagacagaagactgactggctccaactacata
gacgagcctctgcaacaggtcatccagtttgcattgagagattatattcagtattggtat
tacactctgagtgaggatgagtctttcctgctggaaatcagacagactgtccagaacgct
ttggtccagttctctacacggtctaaagacgtggactggcagccttatttcaccaccaga
ctggtggatgacttcgctactcacctccgagtcttcagaaaggcccaggacagactggag
cgcagggatgacaataaacagagggaattgtcggaggagatggtggagtcattctttgag
gcggaggtagagatggagaggaacatctgtagagacgtggtctgcacctccctgaaggat
gaagaagggttcctgagggatctgtgtgaggtgctgctctacctcttactacctcctgga
gacttccacaacaagaacatgagatacttcctcagggagattctggcgcgaggcgttctc
cttcccctggtcaaccagctgagtgatcctgattacatcaaccagtttgttatctggatg
atccgggactctagctgtaactacgaggcgtttatgaacatcttgaagctgacagacaga
gtgtctgagctggaggctgttaaagacaaggccctggaggaactgcagtacctacgatca
ctggacacagcaggagacgatatcaatgtgataaagaatcagatcaacagtctgttgttt
gtgaagaaggtctgtgagaccaggatacagaggctgaagtctgggaaggaggtggatgcg
ctgaaactagctgctaactttggcaagctgtgcatcataccgctggaacacatccttgta
cacaacatcgccctgcagttctttatggactacatgcaggcggctggggcccaggcagag
ctgttcttctggctgacagtggagggctacagagtaacagcccagcaacaactagaggtg
atggagggatggcagaaggatggaaagaagggaggatccactaaaggactgctgaaggct
gcagcactaggggtctatgaacagtacctgtctgataaggcgtcccccagggtgcaggta
gatgagatgtctgtagtcaaactgagagagaagctacagaaggacggcgaccccacgcca
gagatattcgacgacatccagagaaaggtgtatgacatgatgcttcgtgatgagaggtac
tacccgtcgttcagacagagtcccctctacatcaggatgttagctgaactggacatgctc
aaagaaccctcttatagaggatcagatgacggagatggagaatcgttcaatggttctcca
acaggaagcattaatctatctctggatgacctttcgaattcctgcaatgacgacaatata
cagctacacgccttcatctctgatacaggggtgtgtaacgaccacggcaagacctacgcc
ctctacgccatcaccgtgtgccgccgtaaccacgacggcagcgaggactcctggaaaacc
taccgccgctactctgacttccacgacttccatatgaggatcacggagcaggtaaagttt
gagaacttgacgtcgatcctgaagctgccggggaagaagacgttcaacaacatggacaga
gacttcctggagaagagaaaaaaagacctgaacgcatacctacagctgctgctgaatcca
gagatggtgaaggcctgtcctactctggtcccctatgtctacgacttcctggagaataag
cagtacagcaagggcaagggagacttcgcacgcaagatggatacgtttgtgaacccgctg
cgtagctcgatgcgtaacgtgtccaacgcagtgaagagactgccagacagtctggctgaa
gggatgaacactgctgctgacaacatgggacgcatgtcagagaaactgggacaggacatc
aaacagtccatgttcaaggtgcctccactgctccccaagtctgacattgacccagagcac
tgccgagtctcggcccagctggacgacaatgtggatgataacatccccctgcgtgtgatg
ctgctgctgatggatgaggtgtttgacctgaaggagaggaaccagtggctccgcaggaac
atcaagaaccttctgcagcaactcatcagagccacatacggagacactatcaacaggaag
attgttgatcatgtggacttcatgacagctccagaacaggtggcagactacgtaaagaag
ttcagggattcatactggcccaatggaatcctagcagagtctccaccccgccgggacaag
aacatccgcatgaggacacgggtcgccgccaagaccaacctattgggaatcatgccagat
gagttgaagcacatcatcggggcggatacgactcgtaaaggcatccttcgtgtgtttgac
atgttccaacatggaccaatgaatcgtcggctggtctacgtgctcctagaagggttcctg
gagaccatgttccctcagtacaagttcccagagctgtttgtcaaactgcactcccgttcg
ccacgcacagccagatacacacagaaactcaagagcacctccctgaagaggtga
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