Coregonus clupeaformis (lake whitefish): 121586641
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Entry
121586641 CDS
T08357
Symbol
nkx1.2lb
Name
(RefSeq) NK1 transcription factor-related protein 1
KO
K09309
homeobox protein Nkx-1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121586641 (nkx1.2lb)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
121586641 (nkx1.2lb)
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GFIT
Motif
Pfam:
Homeodomain
Nop14
Motif
Other DBs
NCBI-GeneID:
121586641
NCBI-ProteinID:
XP_041759465
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Position
2:complement(8631610..8639019)
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AA seq
385 aa
AA seq
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MNREKVQVGDVSVAAPPASGVTAQTAVIVVAAPESMDNHGEKRLAANALSVFSCPGGRDI
LQADSRNNSPLQEPAPVAMPMLHRTTSFSVLDILDPNKFTSKKPNPNRTGSEFAFGTENR
GGDDSNHDVEQKSYADDYDTCKKSTGLKEGFMCAYRSDECENDFKRGSHSDSEMQDDVCS
EESSSALTGNAEGELGHHDDDDQASKSPRSPGEQQTQQSGSNGQSNQGKPKRKRSGSDSK
SGKPRRARTAFTYEQLVALENKFKSTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWK
KQNPGADTSAPTGGGQNGNGLGSLSPLSQSPPMSHLSMHTGYPGHGPGGLVCTTQLPFLP
SHAVLSPFMLGSQTYGAPAFYTSHL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaacagggaaaaggttcaggtgggagacgtctcagtcgctgctccgccggcgtccggt
gtgactgcccaaacagctgtgatcgtcgtggccgctccggaaagcatggacaatcacggc
gagaagcggctcgctgccaacgcactgtcggtgttttcctgccccgggggtagagacata
ctgcaagcggacagtcgaaacaactctccacttcaagaaccggctccagtagcaatgcca
atgcttcaccggaccacttcattttcggttttggacattttggacccaaataagtttacg
agcaaaaagcctaatcctaaccgaacaggcagcgaattcgccttcgggacagagaaccgt
ggaggtgatgactcgaatcatgatgtagagcagaagtcttatgcagacgactatgacaca
tgtaaaaaatctacaggactaaaggaggggttcatgtgtgcctacagatccgacgaatgc
gagaatgatttcaaaagaggctcccactctgacagcgagatgcaggatgacgtgtgtagt
gaggagagcagcagcgccctaactggaaacgcagagggggaacttggacaccatgatgac
gacgaccaggcgagcaagagcccaagaagtcctggcgaacagcaaactcaacagtcaggg
tcgaatggacaaagtaatcaaggaaagccgaagagaaagcgctctggctccgattcaaag
tcgggtaagccccgaagggcaaggacagcattcacttacgaacaacttgttgcactggag
aacaaattcaagtccacccgatacctctccgtgtgtgagaggctcaatttggcactgtca
ctcagtttgactgaaacccaagtcaaaatctggttccagaaccgacggaccaagtggaag
aaacaaaaccctggcgcagacaccagcgccccgacaggcgggggccagaacggcaatgga
ctagggagcctgagtccactcagccagtctcctcccatgagccatctgtcaatgcacacg
ggctacccaggtcacggaccaggcgggctagtctgcaccacccaattaccctttctgcca
agtcatgcggtactgtcacctttcatgttaggatctcagacttacggagcacctgcgttt
tacacttcccacctgtaa
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