Coregonus clupeaformis (lake whitefish): 121586655
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Entry
121586655 CDS
T08357
Name
(RefSeq) ataxin-1-like
KO
K23616
ataxin-1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121586655
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Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
121586655
NCBI-ProteinID:
XP_041759486
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All DBs
Position
17:48333176..48516436
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AA seq
826 aa
AA seq
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MKSNQERSNECLPPKKRDFPASTVDERPLVMAPTSESQRGENLAWLASVASGHSSGHDRD
SGGGGGDGVDGGRGGQRTSTPSESDGPQYKPLCSTITTHTDFLVPSSICSISSSSSHQPR
VVTTSLPAMYTSPLSQPGGAIHYTQLPPNLQFISSPYTGPYAGYISSQLLPPPPPTSTSQ
RSHPDPYPNTTITSQSQISSSSLSVAPQTAPSPHSGTHHLPLHLHPHPQHTLALSGGSQV
LVQYAGPGPEGHLTKREEGRPRELHNGELEKRGRYERKESKGTPSSSSSSSSSQYHQLHQ
QQSSQHHYEAYTSHDASGLRTSLMLVPNSHGGPDHHSPNKLPPSSASHAEKGSLLLGKPV
SCTPSSSTSSTFTFPPPLSVESLKAAVSSLSPHTHTVIQTTHSASDASPLSLGQLSTNFY
QAGPGGQPIIGYLAGSAGGQQYHTSLPQHLLIPRAPGSQPIIIPVSGAGVTSLEAAHAAH
IATTTQPQPFPTTLPHAYVTTTTNPKRNPNPKDEHLFEVPAPYPPLSHPAGGTVVQAQLH
LPVVPAPPAPSSAPSLPPYFIKGSIIQLADGELKRVEDLKTEDFIQSAEISSELKIDSST
VERIDGSHTPNFAIVQFSVGEHRAQVSVEVLLEYPFFVFGQGWSSCCPDRTTQLLELPCT
KLTVGDVCISLTLKNLRNGSLKKTQQTQNQAIEITTSCNMGSIHGPLKSSRSARHGEQEN
GVGQRGSRSGCGSVVVGAGGGVQIASENGELRFGAGGEANSKGGQPGDSESSGGAAKPVS
RKRRWSAPEGRKVERSEKEPPLTLPKPSFITQEVKISIEGRSNIGK
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccaaccaggagcgcagcaacgagtgtctgccccccaagaagagagatttccca
gcaagcactgtggacgagaggccccttgtgatggcgcccaccagtgagagccagcgcgga
gagaacctggcatggctggccagcgtagccagcgggcacagcagcgggcacgatagagac
agtggcggaggtggcggagatggcgtagatggcggtagaggtgggcagcgtaccagcact
cccagtgagtctgacgggccacagtacaaaccgctatgctccaccatcaccacacacaca
gacttcctggtcccttcctctatctgctccatctcctcctcttcatcacatcagcccaga
gtggtgaccacatccctccctgccatgtacacctctcctctgtcccaaccaggaggggcc
atccactacacccagctgccccccaacctccagttcatcagttccccttacacaggcccc
tacgctggctacatctcctcccagctcctccctcccccgccacccacctccacatcccaa
cgctcccaccctgacccctaccccaacaccaccattacctcccagtcccagatctctagt
tcctctctgagcgtggccccccagactgccccctcgccccacagtgggacccaccacctg
cccctgcacctgcatccccacccccaacacaccctggccctcagcgggggctcccaggtg
ctggtccagtacgcgggccccggccccgaggggcacctgactaagagagaagagggccgg
cccagggagctgcacaacggagagctggagaagaggggccgctatgagagaaaggaaagc
aaaggaaccccctcctcttcttcctcctcctcttcctctcagtaccaccaactccaccag
cagcagagctcacagcatcactatgaggcctacacctcccatgatgcatcagggctacgg
acctctctaatgctagtgcccaacagccacggaggaccagaccaccacagccccaacaaa
ctaccgccctcctctgcctcgcatgcagagaaaggcagcctcctcttgggtaaacctgtg
tcctgcaccccctcctcctccacctcctccacgttcaccttcccccctccgctcagtgtg
gaaagtctgaaggcggctgtcagctccctgtcccctcacacccacacggtcatccagacc
acacacagcgccagcgatgcgtcgcccctctccctgggccaactctccaccaacttctac
caggctggccccggcgggcagcccatcatcggctacctggctgggagtgcaggggggcag
cagtaccacaccagtctgccccagcacctgcttatcccaagggccccagggtctcaacct
atcatcatccccgtcagtggggccggggtcaccagcctggaggctgcccatgctgcccac
atagccaccacaacccaaccacagcccttccccaccacactaccccacgcttacgtcacc
accactaccaaccctaaacgtaaccccaaccctaaagatgagcatctattcgaggtcccg
gcgccctatccccctctctcccaccctgccgggggcactgtagtccaggcccagctacac
ctccccgtggtcccagcccccccggccccctcctcagccccctcgctgcctccctacttc
atcaagggctccatcatccagctggcggacggggagttgaagcgcgtggaggacctgaag
acggaggacttcatccagagcgctgagatcagcagcgagctgaagatagactcttcgacc
gtggaacgcatcgacggcagccacacgcccaacttcgccatcgtacagttctccgtgggc
gagcaccgcgctcaggtgagtgtggaggtgctgctggagtatcccttcttcgtattcggc
cagggctggtcatcgtgctgcccggaccggaccactcagctgttagaactaccctgcacc
aagctaacagtgggggacgtctgcatctccctcaccctgaagaacttgaggaacggctcc
ctgaagaagacgcagcagacccagaaccaggctattgagatcactaccagctgcaatatg
ggctccatccacgggcccctcaaatcctccaggtcagccaggcacggggagcaggagaac
ggggtgggccagagaggctccaggagtggatgtgggagtgtggtggttggagcaggtgga
ggtgttcagatcgcctcagagaatggggaactgaggttcggcgccgggggagaagccaac
tcgaaaggaggccagcctggagattcagaatccagcggtggtgccgccaagccggtgagc
cgcaagaggagatggtcggcccccgagggccgtaaggtggagaggagcgagaaggagccc
ccgttgactctgcccaaaccttcctttatcactcaggaggtaaagatcagcatcgaaggc
aggtcaaatataggcaagtag
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