Coregonus clupeaformis (lake whitefish): 121586666
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Entry
121586666 CDS
T08357
Name
(RefSeq) rho family-interacting cell polarization regulator 2-like isoform X1
KO
K24818
Rho family-interacting cell polarization regulator
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121586666
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121586666
Cilium and associated proteins [BR:
cclu03037
]
Other cilia and associated proteins
Stereociliary proteins
121586666
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Other domain-containing proteins
HEAT repeat domain-containing proteins
121586666
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PL48
HEAT_2
HR1
ARM_ARMC5
DPC2
SHE3
Motif
Other DBs
NCBI-GeneID:
121586666
NCBI-ProteinID:
XP_041759505
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Position
17:complement(47755036..47817962)
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AA seq
1112 aa
AA seq
DB search
MHGWSGAVNRHYIGFSSSKFFRGVSSRVPEIMAAGTHSPGGPNGIIRSQSFAGFSTLQER
RSRCNSFMGNSVVQKKPPSKPKKPHLSGHKASSGSRVPQPKRVEEVYGALKQGLDEYLEV
YQTELDKLTSLMKDMKRNSRLVRQDGVLYDLDKQIKTIERYMRRLEFHMSKVDELYEVFC
IQRKLREGASKMKQAFSASPSTKASRESILEVNRRYKEYTENMSTFEVELENLLGEFHIK
MKGLAGFARLCSGDQYEIFMRYGRQRWKLKGKIEVNSRQSWDGEEMVFTPLITDLINIKV
TELKGLATHILVGSVICETKDLFTAMPQVVAVDVNDLGTIKLNLEVTWFPFDVEDLTLSS
GNVSKATALQRRVSVYSQGTPETPTFQDQSFFELHPRPSPTQHRFSFLHALRNSLLEKLR
CSRSFGDLASLRPRPKSSLEVYVSESTLPDDVFENGVCGNAECKRLSFTFSDTSVSSPSP
SLAPGQSNPEITVTPPETDPWPQISQREDKGVEETVRVHADVVEEEEGEEEEESGDSGGS
VSASLVSEEAESEWERAEFQCNVGSSSLCSESQLSAVAPEDVFLDHAGPDRDGDEDDSSE
LLKPVELDTEEPGSLTRQLVRRLTSSDILPEVVALSWAGEGSRAFLESSLEEALHSLLLR
LESLGQRCRELQDLEQEVMRLEDLLKCRLPGHRSRSSSLSLTVESALESFDFLNTSDFDD
DDTGDDHALHSSVFFDMEVERIGPGGQHPEARGHLSEALTEDTGVGNSVAGSPLPLTTGN
ENLDVAIVIHLQYCDHLIQLLSSGGNPWQRRAQLQKLSAQTQLLEELGEISTERLGSITS
AADVLPGLAERPALMALWSECSGSGGLFHTTLDRVLKHMHHSYTSPLQEKHPHTTAETVI
WLVVSEMVDRSDLACPPPSALSQDVLTVFQFHSYVSEHSVGDMEQHLLQVAREALFAEGL
SGGDSERCLKELEEVSHTGLCPQLQTLRALASLLSHQDPQLSKAAAAYITAAASHTPFRS
KAVDCYTQALSEGRIQTQRSACAALSYLQAVESIRAVVSLCDSADEELHHVAIKTLLALG
EEGRLAYEQLDTVPRELVQLGTRRGNAVTTAF
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgcacggatggagcggcgcagttaaccgacattacataggattcagttcaagtaagttt
ttcagaggagtgtcgtcccgcgtcccagagatcatggcggctggaacccactcccccggg
ggacccaatgggatcatccggagccagtccttcgccggcttcagcacgctacaggagaga
cgctcgcggtgtaactcgttcatggggaactctgtggtgcagaagaagcccccgtccaag
cccaagaaaccccatctgtcagggcacaaggccagcagcggctccagagtgccccagccc
aagagggtggaggaggtgtacggggccctcaaacaaggcctggatgagtatctggaggta
taccagactgagcttgataaactcacctctctgatgaaggacatgaagaggaactccaga
ctggtgagacaggatggagtcctgtacgatcttgacaagcaaatcaaaaccatcgagagg
tatatgaggcggttggagtttcacatgagcaaggtggatgagttgtatgaggtgttctgt
atccagcggaagctgagggagggagccagtaagatgaagcaggccttctctgcctctccc
tccactaaggccagcagagagagcatattagaggtcaaccgcagatacaaggagtacaca
gagaatatgagcacatttgaggtggagctggagaacctgttgggggaattccatatcaaa
atgaaaggtcttgctggctttgctcgtctctgttcaggagaccagtatgagatcttcatg
cggtatgggcgtcagcgatggaaactgaaggggaagatagaggtgaactccagacagagc
tgggacggagaggagatggtcttcacgcccctcatcacagacctcatcaacatcaaggtt
accgagctgaagggtctagccactcacatcctagtgggcagtgtgatctgtgagaccaag
gacctgttcaccgccatgcctcaggtggtggctgtcgatgtcaacgacctgggaacaatc
aaactcaatctggaggtcacatggtttccgttcgatgtggaggacctgaccctgtcttca
ggcaacgtgagcaaggccaccgccctgcagagacgggtgtctgtctacagccagggcacg
ccagagacacccaccttccaagaccagtccttctttgagttgcacccccgcccctccccg
acccagcatcgcttctccttcctccacgccctgaggaactccctgttagagaagctgaga
tgcagtcgctcctttggcgacctggcctccctccgccccaggcccaagtccagcctggag
gtctatgtgagtgagtccaccctgcctgacgacgtctttgagaacggtgtgtgtggcaac
gctgagtgcaagcgcctctccttcaccttttccgatacctcagtctcctcccccagccca
agcctcgcccccggccagtccaaccccgaaatcaccgtcacgcctcctgagaccgacccc
tggccccaaatatcccagagggaagacaaaggggtagaagagacggttcgggtgcacgca
gacgtagtggaagaggaagagggtgaggaggaagaggagagtggtgacagcggcggtagt
gtgagcgctagcctggttagcgaggaggcggagtcagagtgggagagggcagagttccag
tgtaacgtaggttcctcttctctctgctcggagagtcagttgtcagctgtggctcctgag
gatgtgttcctggaccacgctgggcctgacagggatggagatgaggacgacagctcggag
ctgctgaagcccgtggaactggacactgaagaaccaggcagcttgaccaggcagctggtg
aggaggctgacgtcgtccgacattctgcccgaggtggtggctctgagctgggccggggag
ggaagcagggccttcctggagagcagcctggaggaggccctgcacagcctgctgctgagg
ctggaatcactgggacaacgctgtagagagctgcaggacctggaacaggaagtgatgcgc
ctggaggacctgctcaagtgtcgtctcccgggccacaggagcaggtcgtccagcctcagc
ctgacggttgagagcgccctggagagctttgacttccttaacacctctgacttcgacgat
gatgatacgggtgatgaccacgctctccacagctctgtgttctttgacatggaggtggag
agaattgggcctggaggccagcacccagaggccagaggccacctgagtgaagccctgacg
gaggacaccggggtgggcaacagtgtggccggcagccccctgcctctcaccaccggcaat
gagaatctggatgtggccatcgtcattcacctgcagtactgcgatcatctcatccagctc
ctgtccagtggagggaacccttggcagcgtagagcccagctccagaagctgtcagctcag
actcagctgttagaggaactgggagagatcagcacagaacgcctcgggagcatcacctca
gctgctgacgtgctcccagggctggcagagcggcctgctctgatggctctgtggtcggag
tgtagtggttctggaggactgttccatactacgctggacagggtgcttaaacacatgcac
cacagctacaccagcccactgcaggagaagcacccacacaccacagctgaaacagtgatc
tggctggtggtgagtgagatggtggacaggagtgatctggcctgccctcctccctcggcc
ctgtcccaggacgtcctcacagtgttccagttccacagctacgtctcagagcacagcgtt
ggggacatggagcaacacctactgcaggtggccagagaggctctgtttgcggagggcctg
agcggcggcgactcggagcgttgtctaaaggaactagaggaggtgtcacacaccggcctg
tgtccccagctgcagaccctcagggccctggcctccctcctctcccaccaagacccccag
ctcagcaaggctgcagctgcctacatcactgctgctgcctctcacacaccctttaggtca
aaggcggtagactgctacacacaggctttgtcggaggggagaattcaaacccaaaggtct
gcctgcgctgctctcagttatttacaggcagtggagagtattcgagcggtggtgtcgctg
tgtgactcggcagatgaggagcttcaccacgttgccataaaaaccctgctcgccttggga
gaggaggggcgtctggcgtatgagcagctggacacagtgcccagggagctggtacaactg
gggacacggcgagggaatgctgtcaccaccgccttctga
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