Coregonus clupeaformis (lake whitefish): 121586682
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Entry
121586682 CDS
T08357
Name
(RefSeq) homeobox protein Hox-A5
KO
K09305
homeobox protein HoxA/B/C5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121586682
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
121586682
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF2209
Motif
Other DBs
NCBI-GeneID:
121586682
NCBI-ProteinID:
XP_041759534
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Position
17
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AA seq
282 aa
AA seq
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MSSYFVNSFCGRYPNGADFQLHNYGDHSSANEQYRDSTTIHSSRYGYGYNGMDLTVNRGN
GHFMASVRAQGYSPNQSVAATTSSVETPRYTQPASATETASLSPPPDPLPCSSSVASCSS
PISESQPQHRDIKNSITSPCTAPSSNGGTLLNRVCVSKASPLQEEKPAGSAQTTSQNVTD
GAQPHIYPWMRKLHINHDSLTGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAH
ALCLSERQIKIWFQNRRMKWKKDNKLKSMSMAAAGGVGYHHP
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagctcctattttgtaaactcattctgcggtcgctatcccaatggcgcggacttccag
ttacataattatggagaccacagctccgcaaacgagcaatacagggactccacgaccatc
cattccagcaggtacggttatggctacaacgggatggacctcactgtcaatcgcggtaac
gggcactttatggccagcgtgagggcacagggctactccccgaaccagtcggtggcggca
acaacgtcctctgtcgagacgcccaggtacacccagcccgcgagcgccaccgagacggcg
tccctctcgcctccacctgacccgctcccatgctcctcctctgtcgcgagctgctcgtct
ccgatcagcgagtctcaacctcaacaccgagacataaagaactccataacgagcccctgc
acggccccgagctcgaatggaggcacgctgttgaaccgggtgtgtgtgtccaaagcgtcc
cccctccaggaagagaagcccgcgggaagcgcgcagacaacttcacaaaatgtcaccgac
ggtgcccagcctcatatttacccctggatgaggaaactgcacataaatcatgacagtttg
accggaccagaagggaagagggcgaggacagcctacacgcgttaccagacactggagctc
gagaaagagttccatttcaaccggtatctgacccgcagacggaggatcgagatagcgcac
gcgctctgcctatcagaacgccagatcaaaatctggttccagaaccggagaatgaagtgg
aaaaaggacaacaaactaaaaagcatgagcatggcagcggcagggggtgtagggtaccac
catccctga
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