Coregonus clupeaformis (lake whitefish): 121586694
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Entry
121586694 CDS
T08357
Name
(RefSeq) gasdermin-E
KO
K22146
gasdermin-E
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
121586694
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121586694
Transporters [BR:
cclu02000
]
Other transporters
Pores ion channels [TC:
1
]
121586694
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gasdermin
Gasdermin_C
Motif
Other DBs
NCBI-GeneID:
121586694
NCBI-ProteinID:
XP_041759548
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All DBs
Position
17:50048777..50058705
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AA seq
495 aa
AA seq
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MFAKATANFVRQIDPDGTLISVSRLNDSDKLVPMALVVKRNRFWFWQRPKYLPSDFTLSH
LLLGDKELTPDVSESDFLSYEGRFGDNLSGKLDAKAGNISVSVEGRGSSKLQLSFGKLKK
QDVDVQKLLLASNDRMVDMQHVLVQQCQKRAEVFAVLKERILTTTPCSISEQVQEQGTCQ
GVLGLLGKLGTHSVKVCVQENSSIEMDSDVSLEIPPLTVIAYSLIELEVRKDGHYELCLQ
HGTLGGFEAGSGRTSPSQDSFDTLCVVDGQEWTEKEIPEGAPLSALQKNLQDLEVYLRQL
AVLPESTRSTLFQRLREVLVDRTTLTVLEHTLEVWCRGKDLDPTEVKELSVSQNKSVSTL
LDLVQKGPTNQIQADGASTPLHLTATHLLVSALEALPDAALTLLGESSPDVIEALNTLVI
KLKVNGQSLPLESLPHPLQDKGAFKWAEQLLLSSNVMLRRETDRLWAETGKMPGVFPLVM
CIAVQGLTSLYTGKG
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccaaggcaactgcaaactttgttcgtcagatcgacccagatggaaccctgatc
tccgtctcccgccttaacgactcagacaagttggttcccatggcactggtcgtcaagcgc
aaccgtttctggttctggcaacggcccaagtacctgccctctgacttcacactcagtcac
ctgttgctaggagacaaagaactcactccagacgtgtctgaatcagacttcctgtcctat
gaggggaggtttggagacaacctgagtgggaagctggatgccaaggctgggaacatcagt
gtcagtgtggaggggcggggctcctccaagctccaattatcattcggcaagctgaagaag
caggatgttgatgtacagaagctattgctggcctccaatgataggatggtggacatgcag
catgtgctggtgcagcagtgtcagaagcgtgcggaggtgtttgctgtgttgaaggagagg
atcctgaccaccaccccctgctccatctcagaacaggtccaggagcagggcacctgccag
ggggttctgggactactgggcaaactggggacacactctgtaaaggtgtgtgtgcaggag
aatagcagtatagagatggacagtgacgtttccttggagattccgcctctcactgtcatc
gcctacagcctcatagagctagaggtcaggaaagacggacactatgagctgtgtctacag
catggtactcttggaggattcgaggcaggctctgggaggacctcgccatcccaggattcc
tttgataccctgtgtgttgtggacgggcaggagtggacggagaaggagattcctgaagga
gcaccactcagcgcattgcagaaaaacttgcaggacttggaggtctatctacgtcagtta
gcggttctcccagagtcgacccggtccactctgttccagaggctccgtgaggttctagtg
gacagaaccacactcacggttctggaacacacgttggaggtctggtgtagaggtaaggac
cttgaccctacagaggtaaaggagttgtctgtttctcagaacaaatctgtctccacccta
ttggacctggtccagaaaggcccaacaaatcagatacaggctgatggagcatccaccccc
ctccacctgactgccactcacctgctggtcagcgccttggaggcgttgcctgatgctgct
ctgactctgctgggagaatctagccctgatgtcatagaagccctcaacactctggtgatc
aagctaaaggtaaacggtcagtccctcccccttgagtcactgccccaccccttgcaggac
aagggggcattcaaatgggcagagcagctcctcctctcatccaatgtgatgctgcggaga
gagactgacaggctttgggcggagaccggaaaaatgccaggagtgtttccattggtcatg
tgcatcgctgtgcaaggactgacatctctgtacactgggaaggggtag
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