Coregonus clupeaformis (lake whitefish): 121586703
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Entry
121586703 CDS
T08357
Name
(RefSeq) TBC1 domain family member 5
KO
K18469
TBC1 domain family member 5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121586703
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
121586703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
CDC45
Motif
Other DBs
NCBI-GeneID:
121586703
NCBI-ProteinID:
XP_041759561
LinkDB
All DBs
Position
Unknown
AA seq
852 aa
AA seq
DB search
MQHPNFETHHPLQPEGEQETVFDPLHNFNRNRSRGGSLDSSTLSYSESESTFLSYRKEWD
DLFLNSNYLARIRQAGISGRLRSSRFRSVCWKLYLEVLPEDKSQWLNKTKELRAQYEKIK
ETHITNPRKAAGQQDLVVNNPLSQDEGSLWNKFFQDKELRGMIKQDVMRTFPEMRYFQEE
DVRTKLTDILFCYARENEQLLYKQGMHELLAPIVFVLHCDHQAFQHASETAHPSEEMMSL
LNPVFHEHDAYAMFSQLMETAEPWFSSFEREVRRGKDEMLTSMPFARPQDSGPSVAIVTK
VNRIQDQLVKKHDVELHMHVNRLEIAPQIYGIRWVRLLFGREFPLQDLLVVWDALFADSI
TLDLVDYVFVAMLLYIRDALIASNFQTCLGLLMHYPPIGDIHTLLHKALFLRDPKNNPRP
ANYQFQQNLDYYKTRGADLVNNTHASAKMAPLNINKVSSSLLNFGRKLIAPALSGSSGIS
PINSDVLSAPSPLTAGPLPQAEPLSSGHAPLQTQTHPHSQHCRLLKSESMPVHLSKDQTS
RTASSSPSIESLPGGRGHATASPPLPVSRESDISTSSPPLSATKKDSFFNITRSRSHSKT
MMGKKEAEEGLEAQVSFLQGQINDLEAMSKYCAKMMNTHIGKIQEVILQEHLEKEDEVLV
SLAGLKQIKDILKGALRFNQSLLEAEENEEITIADDHYDHAAAAAAIVEQQHANSHHDDH
PYQAAPQRGDGDGEQEAEEEEEEEEEEEEARERTQSEQQASPPESSLSVGSEGKNWDDYI
LVSQDGELQPTEGGAERTPPIRRLRGSLRVEPEGVGAFQDPLMGAASGSSSPDEGSTHSK
DYDFTIVNPQDL
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaccctaactttgagacccaccaccctctccagcctgagggagagcaggagacg
gtcttcgacccgctccacaacttcaacaggaaccgcagccgtggaggatctctggatagt
agcactctgtcttactcagagtctgagtccaccttcctctcctacaggaaagaatgggat
gacttgtttctgaacagtaattacctggccaggattcgacaggcaggcatcagcggccga
ttgcggagcagccgattccgcagtgtgtgctggaagttgtacctggaggtccttcctgag
gataagagccaatggctcaacaagaccaaggagctacgagcccagtacgagaagatcaaa
gagacacacatcaccaacccccgtaaagctgcaggccagcaggaccttgtggtcaacaat
ccgctctcacaggatgaggggagcctgtggaacaagttcttccaggacaaagagctgaga
gggatgatcaaacaggacgtgatgagaacctttcctgagatgcgttacttccaagaggag
gatgtcaggacaaaactgacagacatcttgttctgttacgcccgagagaacgaacagtta
ctgtacaaacagggaatgcatgagttgttggctcctatcgtgttcgtcctgcactgtgac
catcaggcctttcagcacgccagcgagaccgcccaccccagtgaggagatgatgtctcta
ctgaatccagtgttccatgaacatgacgcctatgccatgttctcccagctgatggagaca
gcagaaccctggttctccagcttcgagagggaagtcagaagggggaaggacgagatgctg
accagcatgccgttcgcccggccgcaggactcggggccgtctgttgctatagtgaccaaa
gtgaaccgcatccaggaccagctggtgaagaagcatgacgtggagttgcacatgcacgtc
aaccgcctggagatcgccccgcagatatacggcattcgctgggtgcgtctgctgtttggc
cgtgagttccccctgcaggacctgttggtggtgtgggacgccctgtttgctgacagcatc
actctggacctggtggactatgtctttgtagccatgctgctctatatcagagacgccttg
atagcgagtaacttccagacctgtctgggccttctaatgcactacccacctataggagac
atccacaccctactacacaaggctctgttcctcagagatcccaagaacaatcctcggcca
gccaattaccagttccaacagaatctggactattacaagaccagaggagcggacctagtc
aacaacacccatgccagtgccaagatggcgcctctcaacatcaacaaggtctccagcagt
ctgctcaacttcggtaggaagctcatcgcccctgctctgtcaggctccagcggcatctct
ccaatcaacagtgatgtcctgtctgccccctcccccctcactgcgggccccctcccccag
gccgagcccctgtcgtctggccatgcacccctgcagacacagacacacccccattcccag
cactgccgccttctcaagtctgagagcatgcctgtccacctgagcaaagaccaaacctcc
aggacagctagctcctcccccagcatagagagcctccctggggggcggggtcacgccacg
gcatccccgccccttcctgtctccagggaaagtgacatcagcacctcgtccccgcccctc
tcggccaccaagaaggactccttcttcaacatcactcgctcccgctcccacagcaagacc
atgatgggcaagaaagaggctgaggaagggttggaggcccaggtgtccttcctgcagggt
cagatcaacgacctggaggccatgagcaagtactgtgccaagatgatgaacacacacatt
ggtaagatccaggaggtgatcctacaggagcacctggagaaagaagacgaggtgttggtg
tcactggctggactcaaacagatcaaggacatcctgaagggggcgctgcgtttcaaccag
agcctgctggaggctgaggagaatgaggagatcaccatcgctgatgaccactatgaccac
gccgctgccgccgcagccatcgtagagcagcagcacgccaacagtcaccatgacgaccac
ccctaccaggccgcaccgcagcgtggcgacggtgatggagaacaggaggcggaggaggag
gaagaagaggaggaggaagaagaggaagcacgtgagcgcacgcagtcagagcaacaggcg
tctcccccagagtcctctctgtctgtgggctcggaggggaagaactgggacgactacatc
ttggtctcacaggacggagaactgcagcccaccgagggaggggccgagaggacccctcca
atcagacggctccgcggctcactcagggtggagccggagggagtgggggcgttccaggac
cccctgatgggcgcagcgtctggctcctccagcccagacgaaggcagcactcacagcaaa
gactatgacttcaccatcgtcaacccccaggacctgtga
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