Coregonus clupeaformis (lake whitefish): 121586705
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Entry
121586705 CDS
T08357
Name
(RefSeq) ras-related protein Rab-5A
KO
K07887
Ras-related protein Rab-5A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04137
Mitophagy - animal
cclu04144
Endocytosis
cclu04145
Phagosome
cclu04148
Efferocytosis
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121586705
04145 Phagosome
121586705
04137 Mitophagy - animal
121586705
04148 Efferocytosis
121586705
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121586705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121586705
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121586705
04031 GTP-binding proteins [BR:
cclu04031
]
121586705
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
121586705
Endosome - Lysosome transport
121586705
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121586705
Exosomal proteins of other body fluids (saliva and urine)
121586705
Exosomal proteins of colorectal cancer cells
121586705
Exosomal proteins of bladder cancer cells
121586705
GTP-binding proteins [BR:
cclu04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
121586705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
AAA_16
MCR_beta
Motif
Other DBs
NCBI-GeneID:
121586705
NCBI-ProteinID:
XP_041759563
LinkDB
All DBs
Position
Unknown
AA seq
216 aa
AA seq
DB search
MANRGGATRPNGSNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQ
RQASPSIVIALSGNKADLASKRAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAK
RLPKSEPAAAGANSGRNRGVDLTEAAQPTKAPCCSN
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaggggaggagctacgagacccaacgggtctaatgctgggaacaagatctgc
cagttcaagttggtgctgctgggggagtcggcggtgggaaagtccagcctggtgctccgc
ttcgtcaagggccagttccacgagttccaggagagcaccataggagcggccttcctgact
cagacggtgtgtctagacgacacaacggtgaagtttgagatctgggacacagctggacag
gagcgctaccacagcctggcgcccatgtactacagaggggcgcaggctgccatcgtggtc
tacgacatcacaaatgaggagtcatttgcgcgggccaagaactgggtgaaggagctgcag
agacaagccagccccagtattgtcatcgctctgtcaggcaacaaggctgacctcgccagc
aagagagcagtcgacttccaggatgcccagtcttatgcagacgacaacagcttgctcttc
atggagacgtcggccaagacgtctatgaatgtgaacgagatattcatggctattgcaaaa
agattgcccaagagcgagcctgcagccgctggagctaacagcgggcggaacaggggcgtc
gacctaacggaagccgcccagccaaccaaggccccctgctgcagtaactaa
DBGET
integrated database retrieval system