Coregonus clupeaformis (lake whitefish): 121586709
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Entry
121586709 CDS
T08357
Name
(RefSeq) ubiquilin-4
KO
K04523
ubiquilin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121586709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121586709
03051 Proteasome [BR:
cclu03051
]
121586709
Membrane trafficking [BR:
cclu04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
121586709
Proteasome [BR:
cclu03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
121586709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
STI1-HOP_DP
UBA
Rad60-SLD
Ubiquitin_5
UBA_7
YukD
UBA_HOIP
Rad60-SLD_2
CUE
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
121586709
NCBI-ProteinID:
XP_041759571
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MADNGGADPVNNNNNTTVALEGTIIKVTVKTPKDKEEIAISEDASVTQFKEEISRRFKAK
QDQLVLIFAGKILKDGDSLNQHGIKDGLTVHLVIKTAHKAGDGASSSTSSSGTTQEGSSS
GSSSGPSSAAHPSTVGSTGGPASAPPQTPNILTGFGGLSSLSSMGMGSANFMELQQQMQS
QLMSNPEMLSQIMENPLVQNMMSNPDLMRQMIVANPQMQQLMERNPEISHMLNNPELMRQ
TMELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAARDQFGNNPFS
ALGGNSDGGVQPSRTENREPLPNPWGSTNPSEGGGGTGTTGTSTTGSTTPSVSNPLGVNS
ASLGNGMFSSPGMQSLMQQISENPQLMQNMLSAPYMRSIMQSLAQNPDMASQVLMNNPLF
AGNPQLQEQFRSQLPVFLQQMQNPEALSVMTNPRAMQALLQIQQGLQTLQTEAPGLMPSL
APGGLPGGLPGGLPGGLVGGLPGGIPTTPLSTGGGVPPENPASSPSAGENPAQQLMMQQM
LQMFAGGNSSSQSPEVQFQQQLEQLSAMGFINREANLQALIATGGDVNAAIERLLGSQPS
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacggcggcgcagatcctgttaataacaacaataatacaactgttgctttg
gagggaactattatcaaggtcacagtcaaaaccccaaaagataaggaggaaatcgccatc
tcggaagatgcctctgtcactcagtttaaagaggaaatctcacggaggttcaaagccaag
caggatcagttggttctgatctttgcagggaagatactgaaggacggggactctctcaac
cagcacggaataaaggacggcctgacagtccatctggtcataaagacagcacacaaggca
ggagatggcgctagttcctccacctcttcctccggcaccacccaggagggcagcagtagt
ggcagctcctctggccccagttctgcagcccacccctccaccgtagggtccactggaggc
cctgcctcggcacccccacagacccccaacatactgaccgggttcggtggcctgtccagc
ctgagcagcatgggcatgggctcagctaacttcatggagctgcagcagcagatgcagagc
cagctgatgtccaacccggagatgctgtcccagatcatggaaaaccccctggtgcagaac
atgatgtccaacccagacctgatgaggcagatgatcgtggccaacccccagatgcagcag
ctgatggagcgcaacccagagatctcccacatgctcaacaaccccgagcttatgagacag
accatggagctggccaggaaccctgccatgatgcaggaaatgatgcgtaaccaggaccgg
gcgcttagcaacctggagagcatccccggaggctacaatgccctgcgcaggatgtacaca
gacatccaggaacccatgttcagtgccgcacgagaccagtttggaaacaaccctttctca
gccctggggggcaactctgacgggggggtgcagccctcgaggacagagaaccgggagccc
ctgcccaacccctggggctccaccaacccctctgagggtggagggggcacgggcaccaca
ggcacctctaccaccggcagcaccacccccagtgtgtccaaccctcttggtgtcaactct
gccagtctgggcaacggcatgttcagcagtccaggcatgcagagtctgatgcagcagatc
tcggagaacccccagctgatgcagaacatgctgtctgctccctacatgcgcagtatcatg
cagtctctggcccagaacccagacatggcctcccaggtgttgatgaataaccccctgttt
gctggaaacccccagctacaggaacagttcaggagccagctgcccgtcttcctgcagcag
atgcagaacccagaggctctttctgtgatgaccaacccccgggccatgcaggctctcctc
cagatacaacagggcctacagacactgcagacagaggcaccgggactgatgcccagtttg
gcaccaggtgggctgccaggtggtctccctggaggtctaccagggggactagtaggcgga
ttaccaggtggaatacccacaactcccctgtccacgggagggggtgtgcctccagagaac
cccgcctcttcgccgagtgccggggaaaaccccgcccagcaactgatgatgcagcagatg
ctccaaatgtttgcaggagggaattcctcgagccagagcccggaggtgcagttccagcag
cagctggagcagctgagcgctatgggcttcatcaaccgagaggccaacctgcaggctctc
atcgctaccggaggagatgtcaacgctgccatcgagagactgctgggctcacagccctca
taa
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