Coregonus clupeaformis (lake whitefish): 121586724
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Entry
121586724 CDS
T08357
Name
(RefSeq) granulocyte colony-stimulating factor receptor
KO
K05061
granulocyte colony-stimulating factor receptor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121586724
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
cclu04050
]
121586724
04090 CD molecules [BR:
cclu04090
]
121586724
Cytokine receptors [BR:
cclu04050
]
Interleukin receptor families
Prolactin receptor family
121586724
CD molecules [BR:
cclu04090
]
Proteins
121586724
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Lep_receptor_Ig
EpoR_lig-bind
IL6Ra-bind
fn3_2
Motif
Other DBs
NCBI-GeneID:
121586724
NCBI-ProteinID:
XP_041759596
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Position
17:51069363..51081988
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AA seq
869 aa
AA seq
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MASAWIAMFATLLLAFVNGTKDEVHTSPSVEVHTSTPVVALGSPVTASCVIRDDCPLIKG
QAVHIVWHLNQRLIPSGPAAANESGGNSAAANESGWISTVLYSAANQSGWNSTVSIPSFT
DTRGYLTCCVLHTFPCQIVGAVEIRAGFPPPAPQNLSCLTNLTKPETLSCQWDPGQDTHL
PTQYTLHTEIRDLQESNTYVLPPGAQHYRIPRTGFVLFSEIEIYVKAVNALGQATSTPLL
LEPMKSAKFDPPKVLKVQAEPNRYGCLRLSWCLSEQQAWVTIVSLEVRQKTANSKQWSEE
PVPVPRLVRQRPMEVCRLLHGTEYHIQIRVRYHQSPWSEWSNSNTAVTLERAPTGRLDYW
MTVSGEQRQKHLSVHLLWKPSKQFRANGKILSYVVSLQRQPTKKLQLCVTLDSHCVFQLH
RGARKVFLSAGNAAGASSPTEVEVFQHRALAAVSDVNVLPHDERSLLVQWTSIHSSSVTG
YVVEWRPLWKMDPSLILFDHIDRNQSSTLISESIEPYKPYGISVYPRYKEGIGLPQTIEA
YSRQKAPSAAPNLRVRETLYSRIELTWEEIPLCQRNGIVQSYQIFYWDEQGNTKVVTAEL
EKRRVVLEELNPSSSYKAFIMVSTGGGSLNGSEVTLKTEPMDVLAIIMIVISSGVGLSLL
VIISVLACFSTHERLKMCFWPMIPDPANSSIKRWSTSDSMQDIPPVQDMQESSLVYLSHL
SLLDLPKKGLEKRGGQITDDPWCRCSDTSDLGESICGSPHALSPSYLGSHQHSVPYATVV
FDSPYSSQPPSQSHAYLRSESTQPLLEDELEEPSSPKEYQNVPVRGASGEQVSFRECQDD
GPGKGELCTLWDDFPLLRALAMNDVQSET
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagcctggatagcaatgtttgccacgctgctgctggcatttgtgaatggaaca
aaagatgaggttcacacgtccccgtctgtggaggtacatacttccacccctgtggtggct
ttgggttcaccggtgactgcctcttgcgtcatcagagatgactgccccctgataaaggga
caagccgttcacattgtctggcacctcaaccaacgccttattcccagcggtcctgcagca
gccaatgagagtggtggaaactctgcagcagccaatgaaagtggctggatctccacagtt
ttatattctgcagccaatcagagtggctggaactcaacagtgtctatacctagcttcacg
gacaccaggggatatctcacgtgctgtgtcctccacaccttcccgtgccagattgtagga
gcagtggagataagagctggatttccacccccagcaccacagaaccttagctgcctgact
aacctgaccaaaccggaaaccctctcatgtcaatgggacccaggacaggacacccacctg
cccacacagtacactctccacaccgagatcagggacttacaagagagcaacacttacgtg
ctgccgccaggggcacaacactacaggataccacgtaccggctttgttctcttctcagag
atagaaatatatgtcaaggcggtgaatgccttgggtcaagccacctcaacacctttgctt
ctggagcccatgaagtcagccaagtttgaccctccaaaagttctgaaggtccaagcagag
ccaaacaggtatggctgcctaaggctcagctggtgtctctctgaacagcaagcatgggtg
accatcgtgagcttggaggtgcgacagaaaacagcaaacagcaagcagtggagtgaagaa
ccagtcccagtgccccgcttagtgcgccagagacccatggaggtgtgtcgtctgctccac
gggacagagtaccacatccagatacgggtcaggtatcaccagagtccatggagtgaatgg
agtaacagcaatactgcagtcacgcttgagagggctcccaccggacgactcgactattgg
atgacggtatctggggagcagaggcaaaagcatctcagtgtacacttgctttggaagcca
tcgaagcagtttcgtgccaatggcaagatcctgtcctatgttgtctcgctccagagacaa
cccacgaaaaagctacagttgtgcgtcacattggatagccactgtgttttccagcttcac
aggggggcaaggaaagtcttcctcagtgctgggaacgctgcaggggcatccagccctact
gaggtggaagtgtttcaacatagagctctggcagcagtctctgacgtcaatgtccttcct
catgatgagcgatcactactggtccagtggacaagcatacattcatccagtgtcacaggc
tatgtggtggagtggaggccattgtggaaaatggacccttccctcatcttgtttgaccat
attgacaggaatcaatccagcactctaatatcagagagcatcgagccgtacaagccctat
gggatctctgtgtatcctaggtataaggaagggattggccttcctcaaaccatcgaggcg
tactctagacaaaaggccccatctgccgccccaaatctgagggtgagggagacgttatat
tctcgtattgagcttacctgggaggagattccactatgccagagaaatgggatcgtgcag
agctaccagatcttctactgggatgagcagggaaacaccaaagtagtgactgctgagctg
gaaaagaggagggtggttctagaagagctcaatccttcgtcctcatacaaagcctttatc
atggttagcacaggtggcgggagtctgaacggatcagaggttaccctcaaaactgaacca
atggatgtcttggctatcatcatgatagttatttcctctggtgttgggctgtcattgctc
gtcattatctcagttctggcctgcttctcaacacatgaacggttgaagatgtgcttttgg
cccatgatccccgaccctgccaacagcagcatcaagaggtggagcacatcggattcaatg
caggatatcccccctgtccaggacatgcaggaatccagtctggtctatctctcccatctc
agcctcctggacctgcccaagaagggtctcgagaagaggggtggccagatcactgatgac
ccctggtgccgctgcagtgacaccagtgacctgggggagtccatatgtggctccccccat
gcactcagccctagctacttagggtcacaccaacactctgttccgtatgccactgtggtc
tttgatagcccgtactcaagtcagccaccaagccagtcccatgcctacctgcgctcagag
tccacacagccactcctggaggacgagctcgaggagccctcaagcccaaaggagtaccag
aatgttcccgtccgtggggcatctggggagcaagtttcctttagagaatgccaggatgac
ggcccaggaaagggagagttatgcactctttgggatgactttcccttgcttagggctttg
gcaatgaatgatgttcaaagtgaaacctaa
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