Coregonus clupeaformis (lake whitefish): 121586733
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Entry
121586733 CDS
T08357
Name
(RefSeq) thyroid hormone receptor-associated protein 3 isoform X1
KO
K13112
thyroid hormone receptor-associated protein 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121586733
Spliceosome [BR:
cclu03041
]
Complex B
Other components
Complex B specific factors
121586733
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Gene cluster
GFIT
Motif
Pfam:
THRAP3_BCLAF1
Methyltrn_RNA_2
Motif
Other DBs
NCBI-GeneID:
121586733
NCBI-ProteinID:
XP_041759609
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Position
17:complement(51257618..51287430)
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AA seq
983 aa
AA seq
DB search
MAHVTLFPLGLSIRDAECLALNVSVQCCSVNYFLCSLFIPMKKHTGSRSRTRSRSRSHSP
SHNNRERNYPREYQNNNREFRGYHRGFRRPYYFRGRGRGYFPRGRFQRGGGGGYNNNYRP
NNWQNYRQHPQQQQQQQQQQQQHPHPHSPRRGRSRTPKKRSGSPRSHSHSKYSDRSSSPP
SRRSRHSSHSSSPTRRSGSGSATQNSKDVKEERSASKDIQKREGGGGGDGEPVEITGGSA
GPDGGAGGDKPKANWQGMTDHSNSTSPKRSSPQVRSAVIIGQGAPATTQASPSPNSTNAN
GPNSNGAPSWQTQTVGSSPSSKSPSQKSPTPVFSGFGFFSKEDNLAGDKAAMFKRFLEEH
NHKKKQSGWENGREMETNGGDVEREKGNGMKSSGGIFDREPDKGEKEKYKYREDFDDEGN
VSLNSFLKASPFFSCDGEEEDEEMIPEPRPKVLRKDRDREDDESPKLKSKVTLSARKLFE
ERFGKWEDLAYLQVAAKDNDLDAMAEEIYRSRKQEKAAAIAAALAKREAIAGMLRGFSPE
NVSKGRRKEKAASSPPPTPPPRRNSDREMFMVRGEDSPPRASGKRGTEFSVRMDSLRDDV
ASSSGVMVGERRLSRDLVHPTKKEQEFHSIFQHIQATELQRSPLELFAQHIVTIVHYIKA
QHFPSNGITLNERFAMYQRRAAEKEMMKPRKSPEIHRRIDVSPSAFKKHSHLFEGMKNSG
DGSYKDEGKNIKGDSMDLRLDIERRKKYSTRERDYKQDGGRDSGDSPEANRERSAEKSSK
HHKKSKGFGPSTSSSRKNKKKPSRSRSSSSSSSAESHRGGDYPHEGFNKARLGPRGDYGG
PMERGRGRGGFQFRIRGRGWNRGNNNTNGNPPNMDIPVHPKNEDWDPEYTPKSRKYYLHD
DREGERKWVDNRGRGGRGNFLRGSRGRFIIRKATVGPPNNNNSSPKWTHDKFQVNRGEEE
GEPQEEDTEQDHKDQEKSEDTVQ
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggcccatgtgaccctctttccactagggctcagcataagagatgcagagtgtcttgct
ctcaatgtgagtgtgcaatgctgctcggtgaactactttctctgctcactctttattcca
atgaaaaaacacactggctctaggtcccgcactcgctcgcgctccagatctcattctcca
tcccacaataaccgagagcggaactacccaagggagtaccagaataataaccgcgagttc
cggggctaccaccgaggcttccggaggccctactacttcagaggccgagggcgtggctac
ttcccacgggggcgcttccagaggggtgggggaggcggctacaacaacaactaccgcccc
aataactggcagaactacaggcagcacccccaacagcagcagcagcagcaacaacagcag
cagcaacacccccacccccacagcccgagacggggacgatcccgtacccctaaaaagcgc
tctggtagccctcgttcccacagccactccaagtactcggaccgctcttcctcgccccca
tcccgccgctcccgccactcctcgcattcttcctctcccacacgcaggtcaggctctggg
tcggccacgcagaactctaaggatgtcaaggaggagcgttctgcctccaaggacatccag
aagagagaaggaggaggaggaggagatggcgagcccgtggagatcacaggggggtctgca
gggcctgatgggggcgccggtggggacaagcccaaggctaactggcagggcatgacggat
cacagcaatagcaccagccccaagaggtcaagtcctcaggtgcgctcagctgttatcatt
ggtcagggcgcaccagcaacgacccaggctagtccctctcctaacagcactaatgctaat
ggccccaattccaatggtgccccctcatggcagacacagacggtgggcagctcgccttcc
agcaaaagcccttctcagaaaagccccacacctgtgttctctggctttggcttcttctct
aaagaggacaacctggcaggagataaagcagctatgttcaaaaggttcttggaagagcac
aatcataagaaaaagcagtccggttgggagaatggcagagagatggaaaccaatggtggg
gatgtggagcgggagaaagggaatggcatgaagtcctctgggggcatctttgacagagag
cccgacaaaggggagaaggagaagtacaagtacagggaagactttgacgatgagggaaat
gtgtcgttgaacagcttcttgaaagcctcccctttcttttcctgcgatggtgaggaagag
gacgaggagatgatacccgagccccgtcccaaggtgctccgcaaagaccgtgaccgggag
gacgacgagtcgcccaagctcaagagcaaagtcaccctctcggcccgcaagctattcgag
gagcgcttcggcaagtgggaggacctggcctacttgcaggtggctgccaaagacaacgat
cttgacgccatggcggaggagatttaccgcagccggaagcaggagaaggcggcggccata
gctgcagccctggccaagagagaggccatagcgggcatgctcagaggcttctccccggag
aatgtcagcaaaggcaggaggaaggagaaagctgcctccagcccaccccccacaccccca
ccacggaggaactctgaccgagagatgttcatggtcaggggggaggactctcccccaagg
gcctctgggaaaagaggaacggagttcagtgtcagaatggattccctcagagatgacgtg
gcaagctcctctggtgttatggttggtgagcgaaggttatcacgggatcttgtgcatcct
actaaaaaggagcaggagtttcactctatcttccagcacattcaggccacagagttacaa
aggagtcccttagagctgtttgcccagcacattgtcaccatcgtccactacataaaagca
cagcactttccatccaacggaattactctaaatgagcgatttgccatgtaccaaagaaga
gctgcggaaaaggaaatgatgaagccaagaaagagcccagagatacacaggagaattgat
gtttctcccagtgcttttaagaaacactctcacctgtttgagggaatgaaaaactccggg
gatggcagttacaaggacgaaggtaaaaacattaagggtgactcaatggaccttcgtctg
gatattgagcgccgtaaaaaatattccacccgggagagagattataaacaggatgggggg
agagattcaggagactccccagaagctaacagggagaggtccgctgagaaatcctccaag
caccacaagaagtccaagggttttggtccctcaacctcttcctccaggaaaaacaagaag
aagccatctcgctctcgctcctcctcttcctcttcatctgccgaatctcacaggggagga
gactacccccacgaaggctttaacaaggccaggctggggcctcggggagactatggtggc
cccatggagaggggacgaggacgcggaggttttcaatttagaataagaggaaggggctgg
aacaggggaaacaataacaccaatggtaatccccctaacatggacataccagttcacccc
aagaatgaggactgggacccagagtacacacccaagagccgaaaatactacttgcatgat
gacagggagggcgagaggaagtgggtggacaaccgaggacgtggaggacggggaaacttc
ctgcgtggcagcaggggccgtttcattatccggaaggccaccgttggcccacccaacaac
aacaacagcagcccaaagtggacacatgacaagtttcaggtcaacaggggggaggaggag
ggcgagccccaagaggaggatacagagcaggaccacaaagaccaggagaagtctgaagac
actgtccaataa
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