Coregonus clupeaformis (lake whitefish): 121586735
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Entry
121586735 CDS
T08357
Name
(RefSeq) ankyrin repeat and IBR domain-containing protein 1
KO
K11967
ankyrin repeat and IBR domain-containing protein 1 [EC:
2.3.2.31
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121586735
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
121586735
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
121586735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
Ariadne
IBR_1
Ank_2
IBR_2
Ank
Ank_5
Ank_4
UBA_ARI1
Ank_3
zf-RING_UBOX
zf-RING_2
zf-C3HC4_2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
121586735
NCBI-ProteinID:
XP_041759614
LinkDB
All DBs
Position
Unknown
AA seq
1110 aa
AA seq
DB search
MGNTATKFRKALINGDEGLAYQLYEGSPQFKESLDPNTSYGEPYQHNTPLHYATRHAMTR
IIRSFLFSKDGNPNKRNAHNETSLHLLCMGPQILMGEGALQPRLARPELDEMKRAECLQI
ILKWTGAKLDQGEYENADVNATDNKKNTSLHYAAASGMKKCVEILVKREADLFAENEDRE
TPCDCAEKQHHQELALSLESQMVFSLAPEGIEAEYAALDHRELYEGLRPQELRRLKDMLI
VETADMLQAPLFTAEALLRAHDWDREKLLEAWMSNSEECCQRSGVHMPSAPPSGYNAWDT
LPSPRTPRTTRSSITSPDEISLTPGDDDRTLCGICMCPVSIFEEPVDMSCGHEFCRACWE
GFLNLKIQEGEAHNIFCPAYDCFQLVPVEVIESVVSREMDKRYLQFDIKAFVENNPAIRW
CPKAGCERAVRLSSQGPGSSSSDPFSQPLLRAPAVDCGKGHLFCWECQGEAHEPCDCQTW
KMWLAKVTEMRPQELAGVSEAYEDAANCLWLLTNAKPCANCKSPIQKNEGCNHMQCAKCK
YDFCWICLEEWKKHSSSTGGYYRCTRYEVINQVEEQKKDMTVEAEKKHNSFQELDRFMHY
YTRFKNHEHSYQLEQRLLKTAKDKMEQLSRALSGREGGPPDTTFIEDAVLELLKTRRILK
CSYPYGFFLETKSTKKEIFELMQTDLEMVTEDLAQKVNRPYLRTPRHKIIRAACLVQQKR
QEFLASVARGVAPSDSPEAPRRSFGGGTWDWEYLGFASPEEYAEFQYRRRHRDRQQRRQR
GDIPDLDEPSDSTLNTQEIGGGRRHGPPMGLGSLDEDDPNILLAIQLSLQESGLAMGGDT
PDFLSNEASLGAIGTSLPSRLDAGPQGVEVGPRGAISSSELLELGDSLMRLGNMRTISSQ
HQYEGSPGVQAPHQHYSNHNLNPFREPSSGGALFSSSSDTTDSTTTTSTGLQDPSHPNTN
LLGNIMAWFHDMNPQSITLIPSTTTTSSDTDLDFNTAAQTTASTNLHQPHAKPQGGEGEV
GEDGDCFPFLSQGLEEMEAERERPTQLDLVVGLEAMAPPCMVTSGTGDRGGERLGGGNVV
HVDTPMCDSVTSDLLPSTSSSEWEEQIHLV
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggggaacacagccaccaagttccgcaaggctctgatcaatggtgacgagggtctggcc
tatcagctgtatgagggtagcccccagtttaaagagagtctggaccccaacacctcgtat
ggcgaaccctaccagcataacactcctctccactacgccaccaggcacgccatgacacga
atcatcaggtcgtttctcttcagtaaggacggcaaccccaacaagcgtaacgctcacaat
gagacgtccctccatctcctctgtatgggcccccagatcctaatgggggagggggctctg
cagccgcggctggcccggcccgagctggacgagatgaagagggccgagtgtctccagatc
atcctgaaatggaccggagccaagctggaccagggagagtatgagaacgctgatgtcaac
gctactgataacaagaagaatacatcgctgcactacgcagccgcctcagggatgaagaag
tgtgtagagattctagtgaagagggaagcggacctgtttgcagaaaatgaggaccgtgag
acgccgtgtgactgtgcagagaagcagcaccaccaggagctggccctcagcctggagtct
cagatggtcttcagcctggccccagagggcatagaggcagagtacgctgctctggatcac
agagagctatacgagggcctgaggcctcaggagctgcgtcgtctgaaggacatgctgata
gtggagacagcagacatgctgcaggcccctctctttactgctgaggctctgctcagagca
catgactgggacagagagaagctgttggaggcctggatgtctaattctgaggagtgctgc
caacggtctggggtccacatgcccagtgctccccctagtgggtacaacgcctgggacacc
ctgccctcccctcgtacccccaggaccacccgctcttccatcacctcccccgacgagatc
agcctcacccccggggacgatgatagaacactgtgtgggatctgcatgtgccccgtgtct
atcttcgaggaaccagttgacatgtcatgtggtcacgagttctgccgagcctgctgggaa
gggtttctgaatctgaagatccaggaaggggaggctcacaacatcttctgcccggcgtac
gactgcttccagctggttcctgtggaggtcatagagagtgtcgtctccagagagatggac
aagcgctacctgcagttcgacatcaaggcgtttgtggagaacaacccagctatccgctgg
tgtcccaaggcggggtgtgagcgggcggtgcgtctctcatcccagggtccaggtagcagc
tcctctgaccccttcagtcaacccctcctcagagctcctgctgtggactgtggcaaggga
catctcttctgctgggagtgccagggagaagcccatgaaccatgtgactgccagacatgg
aagatgtggctggctaaagttactgagatgagaccccaagaattggctggtgtgagtgaa
gcctatgaagatgcagccaactgcttgtggttactcacaaacgccaaaccctgcgccaac
tgcaagtcccctattcagaagaacgaaggctgcaaccacatgcagtgtgctaagtgtaag
tatgacttctgctggatctgtctggaggaatggaagaaacacagctcgtctacgggaggc
tactaccgctgtacccgctatgaggtcatcaaccaggtggaggagcagaagaaagacatg
actgtggaggctgagaagaaacacaacagcttccaggaactggaccgctttatgcactac
tacacccgcttcaagaaccatgaacacagctaccagctggagcagcgtctactgaagaca
gccaaagacaagatggaacagctgagcagggccttgagtggaagagaaggaggcccacct
gacactacgttcattgaagatgcggttctggagcttctgaaaacgcgccgcatactcaag
tgctcttacccctacggcttcttcctggagaccaaatccaccaagaaagagatttttgaa
cttatgcagactgacttggagatggtgaccgaggacctagctcagaaagtaaaccggcct
tacctccgaactccgcgccataagatcatccgagctgcctgtttggtgcagcagaagaga
caggagttcctggcctccgtcgcccgcggggtggcccccagcgactccccagaggcccct
agacgcagttttggaggtggaacgtgggactgggagtatttgggctttgcatctcctgag
gagtatgcagagttccagtaccggcggagacacagagatcgtcagcagaggagacagaga
ggggacattcccgatcttgacgaacctagcgacagcactttaaacacacaggaaattgga
ggtggtcgaagacacggtccccccatgggcttgggctcattggatgaggacgatcccaac
atcctgttggctatccagctgtcactccaagagtctgggttggcgatgggcggggacact
ccagacttcttgtccaatgaggcgtccctgggggccatcggcacctccctcccctccaga
ctggacgcggggccccagggggtggaggtggggccccggggagccatcagcagctcagag
ctcctggagctgggggatagtctcatgagactaggcaacatgaggaccatcagcagccag
caccagtatgaagggtctccaggggtccaggccccacaccagcactacagcaaccacaat
ctcaacccattcagggagccttcttcaggtggggctctattctcatcatccagtgatact
acggactccactaccaccacctcaacagggctccaggacccctcacaccccaacactaac
ctgctgggcaacatcatggcctggttccatgacatgaaccctcagagcatcaccctcatc
ccctccaccaccaccacctcctcagacacagacctagacttcaacacagcagcacagacc
acagccagcactaacctccaccagccccatgccaagccccaggggggtgagggcgaggtg
ggggaagatggggactgtttccccttcctttcccagggcctggaggagatggaggctgag
agggagaggcccacccagctagacctggtggtggggttggaggccatggccccgccctgc
atggtgacttccgggacaggggaccggggcggggagaggctcggtgggggtaacgtcgtt
cacgttgacacacccatgtgtgactctgtgacctctgaccttctgccgagcaccagctct
tcagagtgggaggagcagatacacctggtctga
DBGET
integrated database retrieval system
