Coregonus clupeaformis (lake whitefish): 121586756
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Entry
121586756 CDS
T08357
Name
(RefSeq) elongator complex protein 2-like
KO
K11374
elongator complex protein 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cclu03016
]
121586756
Transfer RNA biogenesis [BR:
cclu03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
121586756
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Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WDR55
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_EIPR1
WD40_RFWD3
Rax2
WD40_MABP1-WDR62_1st
Beta-prop_WDR41
Beta-prop_WDR35_TULP_N
DUF7595
Motif
Other DBs
NCBI-GeneID:
121586756
NCBI-ProteinID:
XP_041759650
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Position
17:complement(54888704..54946722)
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AA seq
835 aa
AA seq
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MAAPIIETCHVACCANRTPNVLSWGRGGLIAYGTCNSVALYDPQEKGVVAILNGHTGRVN
TVQWVHREDCGRETHLVSGASDSLLIVWEVQDGKFNHCVECVGHTGPVCAVDAIHLDNSK
LLIASTASDSTVKLWLYTGSKAECTHTISFGSGFMMDVSLAWLPGSRVPILACGSDDCRI
HLYAQCNGQFRKVLSLQGHEDWIRGVEWACVDGDLLLASCAQDCLIRVWRLVAKSGPERN
TQDERTIRMTEDVFTLTENDASSAFAVTLESVLAGHENKVYGVHWQPPVIKGGDQHQSLS
LLSASMDKTMILWAPEEGSGVWVEQVRVGEVGGNTLGFYGCQMSPDGSMILAHAFHGALH
LWTQSHGKEGEWSPGVVISGHFNAVQDLSWDPEGEFILSVGSDQTTRLLTPWRRKDQTQP
TWHEISRPQIHGYDMQCLALVGRFQYVSGADEKVLRVFRAPRNFVENFANISGTPLAKLL
ASSDTVDQPEGASTPALGLSNKAVFQGDLAPKANEEQGTGFNSVSDQYQESYFHPLILNE
PPPEDHLLQNTLWPEVQKLYGHGFEMFCLASDSGRTVVASACKASKAEHAAVLLWSATSW
RQLQALPCHSLTVTQMAFSPNGRLLLAVSRDRTWSLWRRDDPAATPTNTEPHFSLHTSTR
KDTAIHTRIIWSCDWSSDNKYFVTSSRDKKVIVWGHCSSSEASVTPVEPPVIRPCSSILD
VGDSATAVSFCPVLCPDNSYLLAVGLESGQVLLYKWRPSEEPAGASDWTRYGETDSSQSH
SLTVKRLRWRPRAGRAGQGGEEEGRDTAACSSWVQLASAGADHSVKIFNINRLAV
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcccataatagaaacatgtcatgtcgcatgttgtgcaaatcgaaccccaaat
gttctttcatggggtcgtggggggctcattgcatatggaacatgcaattctgtcgctctc
tatgacccacaggagaaaggtgttgttgctatcctgaatggacataccgggagggtgaac
acagtccagtgggtccacagagaggactgtggtagagaaactcacctggtgtcaggagcg
tctgacagtctactgattgtgtgggaggtccaagatgggaagtttaaccactgtgttgag
tgtgttggacatactggaccagtgtgtgctgtggatgccatccacctggacaacagtaag
ctactcatcgcctccacagcctccgactccactgtcaaactatggctctatactggaagt
aaagcggagtgcacccataccatatcctttgggagcggattcatgatggatgtctcgcta
gcgtggttgccaggcagcagagttcccatacttgcctgcgggagcgacgattgcagaatc
catttgtatgcgcagtgcaatggacagttcaggaaagtcctctccttgcaagggcatgag
gattggatccgtggtgtggagtgggcctgtgtagacggggatctgttactggccagctgt
gctcaggactgtctgatcagggtgtggaggctggttgccaagtctgggccagagagaaac
acgcaggatgaacgcaccattaggatgactgaagatgtctttacactgacagaaaacgat
gcctcctcagcgtttgcagtgacgctagagtcagtcctggccggccacgagaacaaggtc
tatggagtccactggcagccccctgtcatcaaaggtggcgaccagcatcagtctctgagt
ttgctctctgcttccatggacaagaccatgatcctgtgggctccggaagagggctcgggg
gtgtgggtggagcaggtgcgtgtgggggaggtggggggaaacacactgggtttctacggc
tgccagatgagtccagacggatccatgatcctggcccacgccttccacggagcgctgcat
ctctggacccagagccacggcaaagagggagagtggagtccaggggtggtgatatctggt
cacttcaacgcagtgcaggacctgagctgggaccctgagggggaattcatcctcagtgtg
gggtcagaccagaccaccaggctactaacaccctggaggaggaaggaccaaacacagcct
acctggcacgagatctctcgcccccagatccacggctatgacatgcagtgtttggcctta
gtggggcgcttccagtacgtctccggggccgacgagaaggtcctccgagtgttccgcgcc
ccccgcaactttgtggagaactttgcaaacatctccggcacgcctctggcaaagctgctg
gcctccagtgacactgtagatcaaccagaaggtgccagtactcctgccctaggcctctcc
aacaaggctgtgtttcaaggtgatctggctcccaaggccaatgaagagcagggaaccggg
ttcaacagtgtttctgaccaataccaagagtcctatttccaccctctcatccttaatgag
ccccctccagaggaccaccttctccaaaacacactatggcctgaggtccaaaaactgtac
ggacacggctttgagatgttctgtctggcgtctgacagtgggaggacggtggtggcatcg
gcatgtaaggcctctaaggccgagcatgcggccgtgctgctctggagcgccacctcctgg
cgccagctacaggcgctgccttgccacagcctcaccgtcacccagatggccttctctccc
aacggacggctcctattggccgtgtcccgggacaggacctggtcgctatggagacgggac
gaccccgccgctacccctacaaacacagaaccccatttctccctgcacacatctacaagg
aaggacacggccatacatacacgcatcatatggtcatgtgactggagttccgacaacaag
tactttgtgacgtcgagtcgagacaagaaggtgatagtatggggtcactgcagtagttct
gaggccagtgtgacccctgttgaacccccagtcatccggccctgttcctccatattagac
gtaggagactcggccactgctgtctccttctgccccgtcctctgccccgacaacagctac
ctgctggcggtggggctggagagtggccaggtcctgctgtataagtggagacccagtgag
gagcctgctggcgcatcagactggaccagatatggagagacagactcctctcagagtcac
tcgctgacggtgaagaggctgcgctggaggccgagggcaggccgagccggccaggggggt
gaggaggagggcagggacacagcagcatgcagctcctgggtacagctagccagtgcgggg
gcagaccactctgtcaaaatctttaacatcaacagactggctgtgtag
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