KEGG   Coregonus clupeaformis (lake whitefish): 121586756
Entry
121586756         CDS       T08357                                 
Name
(RefSeq) elongator complex protein 2-like
  KO
K11374  elongator complex protein 2
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cclu03016]
    121586756
Transfer RNA biogenesis [BR:cclu03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    121586756
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WDR55 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_EIPR1 WD40_RFWD3 Rax2 WD40_MABP1-WDR62_1st Beta-prop_WDR41 Beta-prop_WDR35_TULP_N DUF7595
Other DBs
NCBI-GeneID: 121586756
NCBI-ProteinID: XP_041759650
LinkDB
Position
17:complement(54888704..54946722)
AA seq 835 aa
MAAPIIETCHVACCANRTPNVLSWGRGGLIAYGTCNSVALYDPQEKGVVAILNGHTGRVN
TVQWVHREDCGRETHLVSGASDSLLIVWEVQDGKFNHCVECVGHTGPVCAVDAIHLDNSK
LLIASTASDSTVKLWLYTGSKAECTHTISFGSGFMMDVSLAWLPGSRVPILACGSDDCRI
HLYAQCNGQFRKVLSLQGHEDWIRGVEWACVDGDLLLASCAQDCLIRVWRLVAKSGPERN
TQDERTIRMTEDVFTLTENDASSAFAVTLESVLAGHENKVYGVHWQPPVIKGGDQHQSLS
LLSASMDKTMILWAPEEGSGVWVEQVRVGEVGGNTLGFYGCQMSPDGSMILAHAFHGALH
LWTQSHGKEGEWSPGVVISGHFNAVQDLSWDPEGEFILSVGSDQTTRLLTPWRRKDQTQP
TWHEISRPQIHGYDMQCLALVGRFQYVSGADEKVLRVFRAPRNFVENFANISGTPLAKLL
ASSDTVDQPEGASTPALGLSNKAVFQGDLAPKANEEQGTGFNSVSDQYQESYFHPLILNE
PPPEDHLLQNTLWPEVQKLYGHGFEMFCLASDSGRTVVASACKASKAEHAAVLLWSATSW
RQLQALPCHSLTVTQMAFSPNGRLLLAVSRDRTWSLWRRDDPAATPTNTEPHFSLHTSTR
KDTAIHTRIIWSCDWSSDNKYFVTSSRDKKVIVWGHCSSSEASVTPVEPPVIRPCSSILD
VGDSATAVSFCPVLCPDNSYLLAVGLESGQVLLYKWRPSEEPAGASDWTRYGETDSSQSH
SLTVKRLRWRPRAGRAGQGGEEEGRDTAACSSWVQLASAGADHSVKIFNINRLAV
NT seq 2508 nt   +upstreamnt  +downstreamnt
atggcggctcccataatagaaacatgtcatgtcgcatgttgtgcaaatcgaaccccaaat
gttctttcatggggtcgtggggggctcattgcatatggaacatgcaattctgtcgctctc
tatgacccacaggagaaaggtgttgttgctatcctgaatggacataccgggagggtgaac
acagtccagtgggtccacagagaggactgtggtagagaaactcacctggtgtcaggagcg
tctgacagtctactgattgtgtgggaggtccaagatgggaagtttaaccactgtgttgag
tgtgttggacatactggaccagtgtgtgctgtggatgccatccacctggacaacagtaag
ctactcatcgcctccacagcctccgactccactgtcaaactatggctctatactggaagt
aaagcggagtgcacccataccatatcctttgggagcggattcatgatggatgtctcgcta
gcgtggttgccaggcagcagagttcccatacttgcctgcgggagcgacgattgcagaatc
catttgtatgcgcagtgcaatggacagttcaggaaagtcctctccttgcaagggcatgag
gattggatccgtggtgtggagtgggcctgtgtagacggggatctgttactggccagctgt
gctcaggactgtctgatcagggtgtggaggctggttgccaagtctgggccagagagaaac
acgcaggatgaacgcaccattaggatgactgaagatgtctttacactgacagaaaacgat
gcctcctcagcgtttgcagtgacgctagagtcagtcctggccggccacgagaacaaggtc
tatggagtccactggcagccccctgtcatcaaaggtggcgaccagcatcagtctctgagt
ttgctctctgcttccatggacaagaccatgatcctgtgggctccggaagagggctcgggg
gtgtgggtggagcaggtgcgtgtgggggaggtggggggaaacacactgggtttctacggc
tgccagatgagtccagacggatccatgatcctggcccacgccttccacggagcgctgcat
ctctggacccagagccacggcaaagagggagagtggagtccaggggtggtgatatctggt
cacttcaacgcagtgcaggacctgagctgggaccctgagggggaattcatcctcagtgtg
gggtcagaccagaccaccaggctactaacaccctggaggaggaaggaccaaacacagcct
acctggcacgagatctctcgcccccagatccacggctatgacatgcagtgtttggcctta
gtggggcgcttccagtacgtctccggggccgacgagaaggtcctccgagtgttccgcgcc
ccccgcaactttgtggagaactttgcaaacatctccggcacgcctctggcaaagctgctg
gcctccagtgacactgtagatcaaccagaaggtgccagtactcctgccctaggcctctcc
aacaaggctgtgtttcaaggtgatctggctcccaaggccaatgaagagcagggaaccggg
ttcaacagtgtttctgaccaataccaagagtcctatttccaccctctcatccttaatgag
ccccctccagaggaccaccttctccaaaacacactatggcctgaggtccaaaaactgtac
ggacacggctttgagatgttctgtctggcgtctgacagtgggaggacggtggtggcatcg
gcatgtaaggcctctaaggccgagcatgcggccgtgctgctctggagcgccacctcctgg
cgccagctacaggcgctgccttgccacagcctcaccgtcacccagatggccttctctccc
aacggacggctcctattggccgtgtcccgggacaggacctggtcgctatggagacgggac
gaccccgccgctacccctacaaacacagaaccccatttctccctgcacacatctacaagg
aaggacacggccatacatacacgcatcatatggtcatgtgactggagttccgacaacaag
tactttgtgacgtcgagtcgagacaagaaggtgatagtatggggtcactgcagtagttct
gaggccagtgtgacccctgttgaacccccagtcatccggccctgttcctccatattagac
gtaggagactcggccactgctgtctccttctgccccgtcctctgccccgacaacagctac
ctgctggcggtggggctggagagtggccaggtcctgctgtataagtggagacccagtgag
gagcctgctggcgcatcagactggaccagatatggagagacagactcctctcagagtcac
tcgctgacggtgaagaggctgcgctggaggccgagggcaggccgagccggccaggggggt
gaggaggagggcagggacacagcagcatgcagctcctgggtacagctagccagtgcgggg
gcagaccactctgtcaaaatctttaacatcaacagactggctgtgtag

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