Coregonus clupeaformis (lake whitefish): 121586772
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Entry
121586772 CDS
T08357
Name
(RefSeq) TBC1 domain family member 20
KO
K20372
TBC1 domain family member 20
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121586772
Membrane trafficking [BR:
cclu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
121586772
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
121586772
NCBI-ProteinID:
XP_041759678
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All DBs
Position
17:complement(55985705..56004407)
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AA seq
405 aa
AA seq
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MKKGKKHQQGTGARVNGNGNAQRHGEHESWKKLKLVEIHQALNCDPVDIETLRRAAISKG
GLLTDEIRRKVWPKLLSVNVYNLPAKPTKDVRENHKDFNQVLLDVRRSMKRFPRGMRVDE
KQVLQEQLIDIILVVLQKNPALHYYQGYHDIVVTFLLVVGERMAIAILETLSNHHLRDFM
DPTMDSTKHILNYLMPILEQVDPQLHDFMLRAEVGTIFALSWLITWYSHVLSEFRHILRL
YDFFLASHPLMAIYFAAVIVLHREKEVKQTECDMAMVHQLLSQIPQDLPYEELITQAHCL
FTCYPPSLLAKCAALQSRKSITINCFKAFQTATEQQRPDSVLRRQLLRARGLGGPDSQLV
LSRDTQPNQAANQLVKMAVWGISATLGAAALAVAQTVLDWAPDFF
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagggaagaaacaccagcaaggtacaggagccagggtgaatggaaatggaaat
gcacagcgacatggagagcacgaatcgtggaagaagctgaagctggtggagatccaccag
gccctgaactgtgacccggtggacattgagaccctgcggagggcggccatcagcaaggga
ggccttctaacagacgagatcagaaggaaagtctggcccaagctgctcagcgtcaatgtg
tacaacttgcctgctaaacctacaaaggatgtccgagagaaccacaaggacttcaaccag
gtgctccttgacgtcaggaggtccatgaaacgtttcccaagaggcatgcgtgtggacgag
aagcaggtgctacaggaacagctgattgacatcatcctggttgttctacagaagaaccct
gcgttacactactaccagggttaccatgacatcgtggtcaccttcctgctggtggtcggg
gagcgcatggccatcgccattttggagaccctttccaatcaccacctcagggatttcatg
gatcctaccatggacagcaccaagcacatactgaactacctaatgccaatactggagcaa
gttgatccacaactacatgattttatgctgagggccgaggtgggcaccatctttgctctg
agctggctcatcacatggtacagccacgtcctgtctgagttccgtcacatcctcaggctc
tatgacttcttcctggcttcacaccccctgatggccatctacttcgctgccgtgatcgtc
ctgcacagggagaaggaggtgaagcaaaccgagtgtgacatggccatggtgcaccaactc
ctgtcccagatcccccaggacctgccctacgaggagctcatcacccaggcccactgcctc
tttacctgctacccgccctccctgctggccaagtgtgctgcgctgcagtcccgcaagagc
atcaccatcaactgtttcaaggccttccagacggccactgagcagcagcggcccgactcg
gtcctccgtcggcagctcctccgggcccgaggcctcgggggcccagactcccagctggtc
ctttccagggacacgcagcccaaccaggctgccaaccagctcgtcaagatggccgtgtgg
ggcatctcagccaccctgggggcggccgctctggctgtggcccagaccgtcctggactgg
gctcctgacttcttctga
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