Coregonus clupeaformis (lake whitefish): 121586777
Help
Entry
121586777 CDS
T08357
Name
(RefSeq) DENN domain-containing protein 3-like isoform X1
KO
K20162
DENN domain-containing protein 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121586777
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
121586777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_EML_2
Beta-prop_LRRK2
WD40_WDHD1_1st
dDENN
uDENN
WD40
Beta-prop_WDR75_1st
Beta-prop_EML
DUF5074
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
121586777
NCBI-ProteinID:
XP_045082362
LinkDB
All DBs
Position
17:56187990..56222338
Genome browser
AA seq
1281 aa
AA seq
DB search
MAHIPSGLLEACVVVGAASDKLRELYQSHQQAKIKELPLLEVEVLQVHAPPFVTKESVSS
ETKGQGHAPAFTRVQRRRSFIKKKMERPCTANGEAAKGIDGGGGTTEDISVPKDLDLIAL
PQLCFPGGLQIASEQREDSYHYLVFTDVLGNRTHAVVVQYYRPIQFSQDGGHQNGHRLSS
KSSRLYTAYGICVISKYPYYNALRDCLSCLLTQLKPSWMGDFEERVKEFSAKLSLVPIPP
PGQLHVVFSLRPLQIVLPSREDKDRPAVDLDLHLPFLCFRPRQLLQIITSLLTEQRVVLL
SCDWAQLTLLAESLMHFIHPLVWQHPFVPVLSSQMLDFLMAPTAYLMGCHLDHYEEVAAE
VATETDDLILVNIDDGTMSSSWSGGVDLPDIPLAARECFLTRAEGLQMHYDLEVCHLGAS
TDVNDLRAQRRQWQRKLNTHIQNITLELIVNIFREVHDHLNYEHRVFNSEEFLRSREPAD
QPFFKKVLDTHIFHSFLRDRLNRKMDAFTRMELSTRTEAYRLRSMTESPRRPTMQELARK
YTSPESRLSKRLGASLPNLGEGVRSLVGPLMYTSLKKIQVDSGLKFPQKPVRCFKLPEFP
PPLAYHYVQNYYQEMITLLGKAISGVASEDSSLLACYHYLRGFVNTVAGKRLDALEDFQN
LYKTDTDIFPGELVNALVDSLQDGERAQANRRTEIKRLISRVKRDHERERACHDDEGVKR
FQLPKKHMQLEDFVRHVQESGIVKDQATIHRLFEALTVGQQKQVDPELFRVFYTFWKETE
AEAQEVALPASVLEHLEANECVFKLSSSVKTSHGVGKIAMTQRRLFLLTVGRPGYVEVTK
FRDIEEVKISSAPFLLLRIPSLKIKTTLRKETFEVNLKSEVDLWHLMVKEMWAGRKMADD
HKDPQYMQQALTNALLMDAVVGCLQSQKAIFAATKLAHFDRMKLEVPMMVPKTTSETLKH
KINPSLDLTSPQAVDVLLYTPGQLGVSSDSEGDGNPKLWCALSDGKVVVFDAASWSMQQS
QVQVGSSRVNCMLGVDRQQVWIGSQDSVIYIMSTRSMSCNKQLTDHRSEVTGLALGERSK
EYSPKVTYSCSEEGTVMTWDVSTLQVRKQFRLSCDRLQSVQLCNGTLWCCARDCIMEVWK
NGTLHRKISLPEQLCGSPTAFSSLLLYHEKEQLWTACIDVGELCVWHLAEPTKPFQRIQL
PDCAGVTCLIKVKNQIWVGSRGRSSGKSRGKIYVVDTQRHTVEKELVAHTDCVQALCSAE
DRYVLSGAAREDGKIAIWKVE
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggcacatattccctctggactgctggaggcttgtgtggtggttggagcagccagcgat
aaactcagggaactctatcagtcacatcagcaggccaaaatcaaagagctccccctgttg
gaggtggaggtactgcaggtgcacgccccaccctttgtgaccaaggagagtgtgagtagt
gagaccaaaggtcagggtcacgccccggccttcaccagggtccagaggaggcgctccttc
atcaagaagaagatggagaggccttgtacggctaatggagaggcagccaagggaatcgat
ggagggggtggcaccacagaggacatcagtgtccccaaggacctggacctcatcgccctg
cctcagctctgcttcccagggggtcttcagattgccagcgagcagagagaagactcgtac
cattacctggtgtttactgatgtcttggggaacaggacacatgccgtagtggtgcagtac
tacaggcctatacagttctctcaggatggtgggcaccaaaatggccaccggttgtcctcc
aagtcgtcccgtctctacacggcatacggcatctgtgtcatctctaaatacccttactac
aacgctctcagggactgcctgtcatgtctcttgacccagctcaagcccagctggatgggg
gactttgaggagagggtgaaggagttttcagccaagctgtcgctggtgcccatacctcca
cctgggcaactgcatgtggtctttagtctgaggcctctccagattgtgcttccctcccgg
gaggataaggacaggccggctgttgacctcgacctccatctgcctttcctttgctttaga
ccccgacagctcctccaaatcattaccagcctgctgacagagcagagagtagtactgttg
tcctgtgactgggcacagctcaccctgctggcagagagcctgatgcacttcatccacccc
ctggtgtggcagcaccccttcgtgcccgtcctctcaagccagatgctggacttcctcatg
gcgcccaccgcctacctcatgggctgtcacctggaccactatgaagaggtggccgcggag
gtagccacggaaacagatgatctgattctggttaatattgatgatgggaccatgtcgtct
tcctggtccggcggggttgacctgccggacatcccgctggcggctagagagtgttttcta
acacgggcggagggtctccagatgcactatgacctggaggtgtgtcacctgggggccagt
acagacgtcaacgacctgagggcccagaggaggcagtggcagaggaaactcaacacacac
atccagaacatcactctggaactcatcgtcaacatcttcagagaagtccacgatcacctc
aactacgaacacagagtcttcaacagtgaagagttcctcaggtctagagaaccagcagac
cagccatttttcaagaaggtgttggacacacacatcttccactcattcctacgggatcgt
ctgaacaggaagatggacgcgttcacacgcatggagctgagtactcggacagaagcttac
aggctgaggtccatgacagagtctccgcgacggcccaccatgcaggagttggcccgtaaa
tacaccagcccagagagccggctcagcaagaggctgggggccagcctgcccaacctgggg
gagggtgtgaggtccctggtggggcccctcatgtatacctccctcaagaagatacaggtg
gacagtggtctgaagtttccccagaagccagtgagatgcttcaagcttcctgagttccct
ccgccgctggcctaccactacgtccagaattactaccaggagatgatcaccctcctgggc
aaggccatcagcggggtggcctccgaggactcctctctcctggcctgctaccactacctc
cgaggctttgtcaacaccgtggctggtaaacgtctggacgctctggaagactttcagaac
ctttacaagacagacacggacatcttccctggcgagctggtcaacgcactggtggactct
ctacaggatggggaacgggcacaagctaaccgccgaaccgagatcaaacgtctgattagt
cgagtgaagagggaccacgagagggagcgggcgtgccatgacgacgaaggtgtcaagcgg
ttccagctgccgaaaaagcacatgcagttggaggactttgtgaggcacgtgcaggagtct
gggattgtcaaggaccaagcgaccattcaccggctgtttgaggctctcactgtgggccag
caaaaacaggtggatccagagctcttccgagtgttctacaccttctggaaagagacggag
gccgaggctcaggaagtggccctgccggcctcggtcctggagcacctggaggctaacgag
tgtgtcttcaagctgtcctcttcggtcaagaccagccacggtgtgggcaagatcgccatg
acccagagacgactgttcctgctgaccgtaggacgacccgggtacgtggaggtaaccaag
ttcagagacattgaggaggtgaagatctcctcggctcccttcctgctgctgaggatcccg
tctctgaagatcaagaccaccctgaggaaagagacgtttgaggtcaacctgaagtcagag
gttgacctctggcacctcatggttaaggagatgtgggccggacggaagatggccgacgac
cacaaggacccccagtatatgcagcaggctctgaccaatgccctgttgatggatgcagtg
gttggctgtctgcagtcacaaaaggcaatttttgctgcaaccaagttggcacactttgac
agaatgaaactggaagtgccaatgatggtgcccaaaaccacgtcagagaccctgaaacac
aagatcaacccatctctggacctgactagcccccaggcggtagatgttctgctctacacc
ccaggacagctgggcgtatcgtccgactccgagggtgatgggaaccccaaactgtggtgt
gccctgagcgacgggaaggtggtggtgtttgacgcagccagctggtccatgcaacaaagc
caagtccaagtgggttcttcacgagtgaactgcatgctgggagtggaccgtcagcaggtg
tggattggctcccaggattccgtcatttacataatgagcacccgcagcatgtcctgtaac
aagcagctgacggaccaccgcagtgaggtcacagggttggccctaggggagcgcagcaag
gaatacagccccaaggtgacatactcctgcagtgaggagggtacagtgatgacgtgggac
gtgtccacactacaggtgaggaaacagttccggctctcctgcgaccgcctccagtccgtt
cagctctgcaatggaacactatggtgctgtgccagagactgcattatggaggtgtggaaa
aatggaacgttgcatcgcaagatctcccttcctgaacagctctgtggctcccccactgcc
ttcagcagcctccttctctaccatgagaaggagcagctgtggacggcctgtatagacgta
ggggagctgtgtgtgtggcacctcgcggagcccaccaagcccttccagaggatccagctg
cccgactgtgcaggcgtcacctgcctcatcaaggtcaaaaaccagatctgggttggcagc
cgcggccggagctcggggaagtccagggggaagatctacgtagtggacacccagcgacac
acggtggagaaggagctggtagctcacacagactgtgtccaggcactgtgctccgcagag
gaccgctatgtgctgagtggggcagcccgcgaggacgggaagatagccatttggaaagtg
gagtaa
DBGET
integrated database retrieval system
