Coregonus clupeaformis (lake whitefish): 121586784
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Entry
121586784 CDS
T08357
Name
(RefSeq) thyroid hormone receptor-associated protein 3-like isoform X1
KO
K13112
thyroid hormone receptor-associated protein 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121586784
Spliceosome [BR:
cclu03041
]
Complex B
Other components
Complex B specific factors
121586784
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
THRAP3_BCLAF1
Methyltrn_RNA_2
Motif
Other DBs
NCBI-GeneID:
121586784
NCBI-ProteinID:
XP_041759690
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All DBs
Position
17:58456526..58488004
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AA seq
948 aa
AA seq
DB search
MSKAPDCPARTRSRSKSRSRSRSCTRSRSRSRSRSRKHRYSSRSRSRSRSHSPSHGRNYP
TRDYQNNRGYQRGYNRGFRRPFYFRGRTRGFYPRHGYQRGGNNYGYRANNWQGGGYRDEP
PHDQDHHGPHSPRRGRSRSRTPRKRSDSRNHSRSRYSDRSSSRGSRQSRRRHSSSSRSSS
PRRRRSSPSSGKPGAKDVQARTMPAEAKEERGEVGEQAGGPGGEGSSHDKASAGKWQGLS
DYNTSPKRSSPAVGAKQGKSDPKGSLCRTMGSTGSVTSTKSPPGPTKAGPTASASGFGFF
GKEDPTRADTTAISSAFKKFLAENKSKKQQQAAEWANGQDGDSREKGNNLFNITSASFSA
KADKSLPFLDRAEEAFLKSQAAEREREEEAKPEGATLTTRDVFGKWEDEPHYYPPGKDEE
RLRDTADNAEEDLELMEEELYRSRKQTSKKEEKKKKTEKRSKRFPSPVTAAVPPGVSGSG
EKDRPLALFPVTRLESPLPRPSGKRDGLELSINTSDEMPSSSGGLTKERGMSRDLAHPTK
KDHGQFRSIFQHIQAAQLRRSPSELFAQHIVTIVHYIKAQHFQSSGMTLSERFAMYQRKA
AEMELIKQRKSPEIHRRIDVSPSAFKRHSHLLEELEECSYKDQGRTAKGDPMDLRLDIER
RKRFSGKEPGLHQWDGGKGSGGSQGPSQERSSEKSSKHRKKSKKTKKNRDRSPSSSSSSS
SPSPFRGFRGKDHTMEHTDQGYSKPRIGPRDYGGPIDRGPPRDYDGPIDRGPPRDYEGHI
DRGPPRDYEGHIDRGPPRDYEGHVDRGRGRGSGGGFLPRVRGGRGWNRGSYQGNSSNGNP
PPNMNTAPSERPPDEEWDPEYTPKSRKYYFHDDREDEKTWLESCGRGAFPHSRGRFIYRK
GGSSPNKWTHDMFHTGEEGGEHREEHHTEMDQKDDNQAAGDPSASSKL
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagcgccagattgccccgcaaggacccgctccagatcaaagtcccggtccaga
tctaggtcttgcacacggtctcgctccagaagccgctccagatccaggaagcaccgatac
agttctaggtcgcgttcccgctccagatctcactctccgtcccacggcaggaactatccc
accagagactaccagaacaaccggggttaccagaggggctacaaccgtggcttccgcaga
cccttttacttccgcggtagaacccggggcttctaccctcgccatggttaccagagagga
gggaacaactacggctacagagccaacaactggcaggggggtggctaccgggacgagcct
ccccacgaccaggaccaccacggtcctcacagccccaggagagggaggtctcggtcccgc
acaccccggaaacgctccgacagccgcaaccactcccggtctcgatactctgaccgttca
tcctccaggggttcccggcagtcccggcggcgccacagctcctcttcccgctcctcgtcc
ccgcggcgtcgtcgcagcagccccagctccgggaagcctggcgctaaagacgtacaggcc
aggactatgccagcagaggccaaggaggagaggggggaggttggggagcaggcaggagga
ccagggggagagggcagcagccatgataaggcctctgctgggaaatggcagggtctgagt
gactataacaccagccccaaacgcagcagtccggctgttggtgccaaacaggggaagtcg
gaccccaaagggtcgttgtgtagaaccatgggcagcactggcagtgttacctctaccaag
agcccaccaggccccaccaaggccgggccgaccgcctccgccagcgggtttggcttcttt
ggcaaggaggatcccaccagggcagatacgactgctatttcctctgctttcaaaaagttc
ttggcagaaaacaagagcaaaaagcagcagcaggcggcagagtgggcgaatggccaggac
ggagacagcagagagaaagggaacaacctcttcaacataacatccgcctccttcagcgcc
aaggccgataagtccctgcccttcctagaccgagccgaagaggcattcctcaagtctcag
gctgctgagagagagcgggaggaggaggccaagcccgaaggagccaccctgacgacacgg
gacgtgtttgggaagtgggaagacgagccccattactaccccccggggaaggacgaggag
agactgagagacacggccgacaacgcggaggaagacctggagctcatggaggaggagctc
taccgcagccgcaagcagacctccaagaaagaagagaagaagaagaagacggaaaagaga
agtaagcggtttccatctcccgtcaccgcagcagtgccccctggggtttcaggcagcggg
gagaaggacaggcccctggccctgttccccgtcactaggttggagtcacccctacccagg
ccctctgggaagagggatggcctggagctcagtatcaacacctctgatgaaatgcccagc
tcctccggaggtctgaccaaggagcgtggcatgtccagggatctggcgcatcccactaag
aaagatcacggacagttccgctccatcttccaacacatacaggctgctcagctccgacgc
agcccctccgagctgtttgcgcagcatattgtcaccattgtgcactacatcaaagcacaa
cacttccaatcttcaggcatgactttaagtgagcgatttgccatgtaccaaagaaaagcc
gctgagatggaattgattaaacaaaggaagagtccagaaatccacaggagaatcgatgtc
tcccccagtgcgtttaagagacactctcacctgctggaagagctggaggaatgcagctac
aaggatcagggtagaacggctaaaggtgacccaatggacctgcgtctggatatagagcgc
cgtaaaaggttttctgggaaggagcctgggctgcaccaatgggacgggggcaagggctcc
ggaggctcccagggacccagccaagagaggtcatcagagaaatcttccaaacaccgcaag
aaatcaaaaaaaaccaagaagaatcgtgatcgctctccgtcctcctcctcctcttcctcc
tctccctctcctttcagagggttcagaggtaaagaccacacgatggagcatacggaccaa
ggctacagtaagcctcgcatcgggccccgggactacggaggccccatagataggggtccc
ccccgggattatgatggccccatcgataggggtcccccccgggattatgagggccacatc
gataggggtcccccccgggattatgagggccacatcgataggggtcctccccgggattat
gagggccacgtggataggggccgaggacgtggaagtggtggaggatttctccccagagtc
agaggaggaaggggctggaacaggggcagttaccaaggaaacagcagcaatggcaaccct
cctcctaatatgaacaccgccccctcagagcgccccccagatgaggagtgggacccagag
tacacccccaagagtaggaaatactactttcatgatgaccgtgaggatgagaagacgtgg
ctggagagctgtggccgaggagccttcccccacagcaggggtcgcttcatctaccgcaag
ggcggcagcagccccaacaagtggactcatgacatgttccacactggggaggaggggggc
gagcacagggaggagcaccacaccgagatggaccagaaagacgacaaccaggccgccgga
gatccctcagcttcctccaaactgtag
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