Coregonus clupeaformis (lake whitefish): 121586788
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Entry
121586788 CDS
T08357
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00061
Fatty acid biosynthesis
cclu00071
Fatty acid degradation
cclu01100
Metabolic pathways
cclu01212
Fatty acid metabolism
cclu03320
PPAR signaling pathway
cclu04146
Peroxisome
cclu04216
Ferroptosis
cclu04920
Adipocytokine signaling pathway
Module
cclu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
121586788
00071 Fatty acid degradation
121586788
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121586788
09143 Cell growth and death
04216 Ferroptosis
121586788
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121586788
03320 PPAR signaling pathway
121586788
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cclu01004
]
121586788
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121586788
Enzymes [BR:
cclu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
121586788
Lipid biosynthesis proteins [BR:
cclu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
121586788
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of breast milk
121586788
Exosomal proteins of breast cancer cells
121586788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
121586788
NCBI-ProteinID:
XP_041759716
LinkDB
All DBs
Position
2:9132548..9156839
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AA seq
697 aa
AA seq
DB search
MQAQQLLNQLRIPELDEVRQYLRSLSTHTLVGVGAFAALTTYWYTTRPKALKPPCDLRMQ
SVEVPGGEYARRSALMDSDKHMTHLYDDAKTMYEFFLRGARVSKNGPCLGARQPNQSYEW
LSYSEVAEKAENLGSALLHRGHTKTKDQFIGIFAQNRPEWAIAELACYTFSLVAVPLYDT
LGTEAITYVIDKATISSILCDVPEKARLVLACVSGREHSVRTIILMEPFDDELVAKGKDC
GIDILSLSQVEAIGKAHHHQPVPPSPEDMAIICFTSGTTGNPKGAMLTHGNVAANCSAFI
KVIEEHLKLDHHDVHISYLPLAHMFERVVEGVILVHGGRIGFFQGDIRLLMDDVATLRPT
VFPVVPRLLNRMFDKIYGQANTSLKRWVLDFAYKRKEAELLSGIVRRDSIWDKLIFRKVQ
ASLGGRVRLMMTGAAPVSATVLTFLRAVLGCQLYEGYGQTECTAGCTMTVPGDWTAGHVG
APLPCNSVKLVDVAEMNYLAANGEGEVCVKGANVFLGYLKDPEKTEETIDANGWVHTGDI
GKWLPNGTLKIVDRKKNIFKLAQGEYIAPEKIENIYTRSDAVAQVFVHGDSLQACLVAII
VPDPDFLPGWAKKRGLEGSYGDLCNNMDVKKAILEDLLKLGKDSGLKSFEQVKDITLYTE
MFSIQNGLLTPTLKAKRAELRNYFREQIDKLYSKIKM
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcccagcagctcctgaatcagctgcgcatccccgagctggatgaggtacggcag
tacctgcgtagcctgtccacgcacacgttggtgggagtaggggcgttcgctgccctcaca
acctactggtacaccacccggcccaaggccctgaagccaccatgcgacctgagaatgcag
tccgtcgaggttccgggaggagagtatgcccgccggtcagcgctgatggacagcgacaaa
cacatgacccacctgtacgacgatgccaagaccatgtatgagttcttcctcaggggcgca
cgggtctccaagaatggtccctgtcttggagcaagacaaccaaaccagtcctatgagtgg
ctgtcatactccgaggtagcagagaaggcagagaacctgggctctgcgctgctccacagg
ggacacactaaaaccaaagaccagttcatcggcatctttgctcagaaccgaccagagtgg
gccatcgctgagctggcctgctataccttctctctggtggctgtgcccctgtatgacact
ctgggtactgaggccatcacctacgtcatcgacaaagccaccatttccagcatactgtgt
gacgtccctgagaaggccaggctagtcctggcgtgtgtgtctggcagggagcacagtgtc
agaaccatcatcctcatggagccttttgatgatgagctggtggccaaggggaaggactgt
ggcatcgacatcctcagcctgagccaagtggaggctatcggcaaggcccaccaccaccaa
ccagttcctcccagtcctgaagacatggctatcatctgcttcaccagtggaaccacgggg
aacccaaagggagccatgctaacacatgggaatgttgctgccaactgctctgccttcatc
aaggtcattgaggaacacctcaaattagaccaccatgatgttcatatatcctacctgcca
cttgcccatatgttcgagagggtcgtggagggggtcattctggtgcacggggggcggatt
ggtttcttccagggagacatccgcctgctgatggatgacgtcgccaccctgaggcctaca
gtgttccctgtggtgccacgcctcctcaacaggatgttcgacaagatctatgggcaggct
aacacctctctgaagaggtgggtgctggactttgcttataagaggaaggaggccgagttg
ctgagtggcatcgttaggagggacagcatatgggacaaactcatctttaggaaagtgcag
gccagtctgggaggacgggtgcgtctgatgatgacgggtgctgcccccgtgtctgcaacg
gtgctgactttcctgcgagctgtgctgggctgccaactgtatgaggggtatggacagact
gaatgcacagctggctgcacaatgaccgtaccaggggattggaccgcaggtcatgtggga
gcgcccctgccatgtaactctgtgaagctggtggatgtggctgagatgaactacctggct
gccaatggagagggagaggtgtgtgtgaaaggagccaatgtgtttctgggctacctgaag
gacccagagaagactgaggagaccattgacgctaacggctgggtccacacaggggacatt
ggcaagtggttaccgaacggcactttgaaaattgtggacaggaagaagaacatcttcaag
ctggcccagggagagtacattgcaccagagaagattgagaatatctacaccaggagtgac
gcagtggcacaggtctttgtgcacggggacagcctacaggcatgcctagtagccatcatt
gtgccagatcctgacttccttcctggctgggccaagaagagaggactggagggatcctat
ggagacctatgcaacaacatggatgtaaagaaggccattttggaagacctcttgaaacta
gggaaagacagtggtctgaaatcttttgagcaggtgaaggacatcaccctgtacacagag
atgttctctatccaaaatggccttctcactcccaccctgaaagccaagcgagcagaactc
aggaactacttcagggagcagatcgacaaactgtactccaagatcaagatgtga
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