Coregonus clupeaformis (lake whitefish): 121586832
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Entry
121586832 CDS
T08357
Symbol
gabbr1b
Name
(RefSeq) gamma-aminobutyric acid type B receptor subunit 1
KO
K04615
gamma-aminobutyric acid type B receptor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121586832 (gabbr1b)
04082 Neuroactive ligand signaling
121586832 (gabbr1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121586832 (gabbr1b)
G protein-coupled receptors [BR:
cclu04030
]
Metabotropic glutamate receptor family
GABA
121586832 (gabbr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
7tm_3
Peripla_BP_6
Sushi
UPF0242
DUF6377
FlaX
Phage_GPO
DUF4407
DP
Motif
Other DBs
NCBI-GeneID:
121586832
NCBI-ProteinID:
XP_041759764
LinkDB
All DBs
Position
17:complement(65495905..65757164)
Genome browser
AA seq
1024 aa
AA seq
DB search
MYINQDSASSPTVLRSQQAEQCNSGGMTLSFLILIVLVSPLLTTAKHNTTTGGCAIIRPP
RDGGIRYRGLTQEQIRSVQVLPLDYEIEYICRGNRVIVGPKVRKCLPNGTWTDLTQRSKC
LLMCPRVWTSLENGRVSEWPLGPPVEGTVLQYSCLTGFILVGRNSTHCNKLGKWDSPKPV
CHYDRHYTGKKKLYIGALFPMSGGWPGGQACLPSAQMALDLVNKRTDILPEYELELIHYD
SMCDPGEATKLLYDLLYTEPIKMVLMPGCSSVSTLVAEAARMWNLIVLSYGSSSPALSNR
QRFPTFFRTHPSATLHNPTRVQLFQKWKWTKIATIQQTTEVFTSTLDDLETRTKEAGIEI
SVRQSFLTDPAPAVKNLKRQDARIIVGLFYETEARKVFCEVYKEKLYGKKYVWFLIGWYA
DNWFKIKDPSINCTVEQMTEAVEGHVTTEIVMLNPETVRGASNLTSQEFLNQLMSKLGGK
NPEETGGFQEAPLAYDAVWALALALNKTVGPLKAKGRRLEDFNYNNRDITAEIYRALNTS
SFEGVSGHVVFDAQGSRMAWTLIEQLQGGSYKKIGYYDSTKGNLSWYGNDKWIGPDPPAD
QTVVIEEFRFLSQKLFVSVSVFAGLGILLGIVCLTFNIYNSNVRYIQNSQPYLNNMTAVG
CMMSLAAVFPLGLDGHHIHRKHFPVVCQFRLWLLGLGFSLAYGSMFTKIWWVHTVFTKKD
DKKEKRKHLEPWKLYTTVGVLLVIDVMSLMIWQIVDPLHITVEKFVREAPKGDLDVLIQP
LLEHCSSDKMNTWLGVVYGYKGLLLLLGIFLAYETKSISTEKINDHRAVGMAIYNVSVLC
MITAPVTMILSSQQDASFAFASLAIVFSVYITLVVLFVPKMRRLITRGEWQSDTQETMKT
QASSTNNNDEEKSRQLERENKELQKIIQEKEERVSELRNQLVERQALRSRRRPSTANQNH
STPLLPVPSNNDPKSLVPPPGYPNPTSDNHSLPPSFSNSSNLYQPDGKISRNNCHTSRIQ
LLYK
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaaccaagactctgcttcctccccaactgtcctccggagccagcaggctgaa
cagtgcaacagtggagggatgacgctgtcatttcttattttaattgtcctggtgtccccc
ctcctcacgaccgccaaacacaatacaaccacaggaggctgtgctatcatacgtcctccc
agagatggagggataaggtacagaggactgacccaggagcagatccgcagtgtgcaggtg
ttaccgctggactatgagattgagtacatctgcagagggaacagagtgatcgtaggaccc
aaggtgaggaagtgtctacccaacggtacctggactgacctcacccagcgcagcaaatgc
ttactaatgtgcccgcgggtgtggacgtctctggagaacgggcgtgtatcagagtggccc
ctggggcccccagtggaggggaccgtactgcagtacagctgtctgacaggattcatcctg
gtcggaaggaactccacacactgcaacaagctgggcaagtgggactcgcccaagcccgtc
tgccactatgacagacattatacaggcaagaagaagctctacatcggtgccctcttcccg
atgagcggaggctggcccgggggccaggcatgcctcccttccgctcagatggccctggac
ttggtgaacaagagaacggatatactgccggagtacgaactggaactgatccactacgat
agcatgtgtgatccaggtgaagccaccaagctcctgtatgacctgctctacactgagccc
atcaagatggtcctgatgcccggctgcagctctgtgtccaccctggtggctgaggccgct
cgcatgtggaaccttatagtgttatcctatggttccagttctccggctctctccaaccgt
cagcgcttcccaacgttcttccgtacccatccgtctgccaccctccacaaccccaccagg
gttcagctctttcagaagtggaaatggactaagatcgccaccatccagcagactacggaa
gtcttcacctcaacgctggatgatctagagacgaggaccaaggaggccgggatagagatc
agcgttcgccagagcttcctcaccgaccccgccccagctgtcaagaacctcaagcggcaa
gatgccagaatcattgtggggctcttctacgagacggaagccagaaaagttttctgtgag
gtgtacaaggagaagctctatggaaagaagtatgtgtggttcctgattggttggtatgca
gacaactggttcaagatcaaagacccgtcaatcaactgcaccgtcgaacagatgacagag
gcggtggagggccacgttaccacggagatcgtcatgctcaacccagagaccgtccgaggg
gcctccaatctgacgtctcaggagtttctgaaccagctgatgtctaagttggggggtaag
aaccccgaggagacagggggtttccaagaggcccctctggcttacgatgcagtgtgggcc
ctggctctggccctcaacaagaccgttgggcccctgaaggccaagggccgcaggctggaa
gacttcaactacaacaaccgagatatcacagccgagatctaccgcgccctcaacaccagc
tcgtttgaaggagtgtcaggccatgttgtgtttgacgcccagggttctagaatggcctgg
actcttattgagcagctgcaaggaggcagctataagaagattggatactacgacagtact
aaaggcaatctatcctggtatgggaatgacaagtggataggtccagaccccccagcagat
cagacagtggttatagaggagtttaggttcctctctcagaagctctttgtctctgtgtct
gtgttcgctggactggggatcctactggggatagtgtgtctcacattcaacatctacaac
agcaatgtcaggtacatccagaactcccagccctacctgaacaacatgacggcggtgggg
tgtatgatgtctctggctgctgtgttccctctgggccttgacggacaccacatacacagg
aagcatttccccgttgtctgccagttccgtctgtggctgcttggcctgggcttcagcctg
gcttacggctctatgttcactaagatctggtgggtccacaccgtcttcaccaagaaggat
gacaagaaagagaagaggaagcacctggagccgtggaaactctacaccaccgtgggggtg
ctgctggtcatcgacgtgatgtcactcatgatctggcaaatagttgatcctctacacatc
actgtggagaagtttgtcagagaggcccctaaaggagacctggatgttctgatccaacct
ctgctggaacactgcagctcagacaagatgaacacttggcttggggtggtgtatggctat
aagggcttgctgctgctcctggggatcttcctggcttatgagaccaagtctatatctaca
gagaagatcaacgaccaccgcgctgtgggcatggccatctataacgtctcagtgttgtgt
atgatcacggctcccgtcaccatgattctgtcgtcgcagcaggacgcctcgtttgccttc
gcctccctggccatcgtcttctctgtatacatcaccctggtggtgcttttcgtccccaag
atgcgtcggctgatcacccgaggggagtggcagtctgacacccaggagaccatgaagaca
caggcctcatccaccaacaacaacgatgaggagaagtccagacagctggagagagagaac
aaggaactacagaagatcattcaggagaaagaagagagggtgtcggaactgcgaaaccag
ctggtggagcgacaagccctccgctcccgaagacgaccctccacagccaaccagaaccac
agcacaccccttctccccgtcccctcgaacaacgaccccaaatccctcgttcccccaccg
gggtaccctaaccccacctcagacaaccactccctccctccatccttctccaactcctcc
aacctctatcagcccgatgggaagatcagtagaaacaactgccacaccagccgtatacag
ctactgtacaagtaa
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