Coregonus clupeaformis (lake whitefish): 121586860
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Entry
121586860 CDS
T08357
Symbol
trit1
Name
(RefSeq) tRNA dimethylallyltransferase isoform X1
KO
K00791
tRNA dimethylallyltransferase [EC:
2.5.1.75
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cclu01006
]
121586860 (trit1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cclu03016
]
121586860 (trit1)
Enzymes [BR:
cclu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.75 tRNA dimethylallyltransferase
121586860 (trit1)
Prenyltransferases [BR:
cclu01006
]
Compound prenylation
tRNA dimethylallyltransferase
121586860 (trit1)
Transfer RNA biogenesis [BR:
cclu03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
121586860 (trit1)
Prokaryotic type
121586860 (trit1)
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
IPPT
zf-C2H2_jaz
IPT
zf-met
AAA_33
AAA_16
Hpr_kinase_C
Motif
Other DBs
NCBI-GeneID:
121586860
NCBI-ProteinID:
XP_045082384
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Position
17:60684470..60781455
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AA seq
486 aa
AA seq
DB search
MAAPVRGLQCALKKSTVPPLVVILGATGTGKSKLAIEIGKRRQGEIISADSMQVYRGLDI
ITNKVTAEERAQCRHHMISFVDPLVSSYTVVDFRNKALALIEDMYSREKLPIIVGGTNYY
IESLLWRVLMDKGQENEGEGKDGGSPDRKAELEKLGGAELHRRLTVVDPEMASMLHPHDT
RKMARSLQVHAETGVPHSHWLEEQRGQEGGDGLGGPLRYPDPCIFWLHADTESIDERLDR
RVDDMLSTGLIAELRDFHLRFNQQKIQDQSQNYQHGIFQSIGFKEFHEYLTCPDETTQED
RDTLRTKGVENLKMATRRYARKQNKWVRNRFLKRPGDNVPAVYGLDVTDVSEWEETVLSP
ALHILDSLTKGERPAVEPIKVEGAGQRNKRSRHACELCDKVIIGDLEWTAHLKSKKHHYH
VRKKRKSEPESEPASDQPQGTTPPPTPTTDGPTLGKPTTLAPGSAEACGEPDSPGTSPTE
KESPVL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccgtacgaggcttgcagtgtgctctgaaaaaaagtactgtaccaccgtta
gtcgtgattttaggagcaaccggtactgggaagtctaaactggcgattgaaattggtaaa
cgacgtcagggagagataatcagtgccgattccatgcaggtgtaccgtggtctggacatc
ataaccaataaggtgacggctgaggagcgtgcccagtgcaggcatcacatgatcagcttc
gtggatcccctggtcagcagctatactgtggtggacttcaggaacaaggccctggcgctc
atagaggacatgtacagcagagagaagctgcctatcatagtaggaggaactaactactac
atagaatcactgctgtggagagtactgatggataaagggcaggagaatgaaggagagggg
aaggatggtgggtctcctgataggaaggcagagctggagaaactgggcggggctgagctc
cacaggagactgacggtggtcgatcctgaaatggcctccatgctgcaccctcacgacacg
cgcaagatggccaggagcctacaggtgcatgcggagacaggcgtgcctcacagccattgg
ttggaggagcagagagggcaggaggggggagatgggctgggggggccactgaggtaccca
gacccctgtatcttctggttacacgctgacacagagtccatagatgagcgcttggacagg
cgtgtggatgacatgctgtcgacaggcctgatagccgagctccgggatttccacctgaga
ttcaaccagcagaagattcaggaccagagtcagaactaccagcacggtatattccagtct
ataggttttaaggagttccatgaatacctgacctgtcctgatgagactacacaggaggac
agagacacgctcaggaccaaaggtgtagagaatctgaagatggctactagacggtacgcc
aggaaacagaataaatgggtccgtaatcgcttcctcaagagaccaggggacaacgtccca
gcagtgtatggtctggatgtgactgacgtgtcagagtgggaggagactgtcctaagcccc
gccctacatatactggatagccttactaagggggagcggcctgcagttgagccaataaaa
gtggagggggcagggcagaggaacaagcgaagccgtcacgcctgtgagctgtgtgacaag
gtgatcatcggagacctggagtggacagcccatctcaagtctaagaaacaccactatcac
gtgaggaagaagaggaagtctgaaccagaatctgaaccagccagcgaccagccccagggg
actactccacctcccacccccactacagacggccctaccctgggtaaacccactactcta
gcccctggctcagctgaggcctgtggagaaccagattccccaggtaccagtcctactgag
aaagaatcccctgttctatag
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