Coregonus clupeaformis (lake whitefish): 121586865
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Entry
121586865 CDS
T08357
Name
(RefSeq) uncharacterized protein LOC121586865
KO
K10377
syncoilin 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121586865
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
121586865
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Filament
Rota_NSP3
Motif
Other DBs
NCBI-GeneID:
121586865
NCBI-ProteinID:
XP_041759811
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Position
17:complement(60301377..60310359)
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AA seq
813 aa
AA seq
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MEDQESKLPMDPEICFDPLFIDEEDQYGDEGVEEETGASFQPLLGVTSTKTLLTGSAHSQ
SSLWDTYRDTHLDETKTQFKDPMFRSVGETRDSFGPHLLATDTNTHLSGLGQIQPHLSGL
GQIQPHLSGLGQIQPHLSGLGQIQPHLSGLGQIQPHLSGLGQIQPHLSGLGQIQPHLSGL
GQIQPHLSGLGQIQPHLREMDDLLKSCEDMTGVSFDSQLSTRYTDTHLSGPAQDQNQSDI
QKMDAMMGSCGGNDSPTRATILTYTDTHTENQCQSHLKEVESILDQSGATGAAVQPQLPP
LTSAGTQLSGTMAEYQTELMAMLAMLENCMEEAGITFDPLEWTYPSLPKGYGQPNPNMNK
GTQDRHVERGVAMQRHMESVGNTKTGGLESGGCVDLKPYLGSTFGQFEPPSYQAISTERH
SDELGGCGETHTRGHMSRVCEEDTEGHVSGVSLGDTEAHIMWGQQLETGVGRVELRGSVQ
ELEVLGTVLEGCIEEVGRLEKRRDELMGELKALREEKTGTEEGSEGGQAAQLRQVLNIEA
DGRREARVKEWQSLRAERSEEQRRLSSVRLERQGLQEEMRRLKRRLFSVARESAHNQVIL
ATQQREVAQLNKEQMELDTLIIQLTEDVSQLRSTHQTQLSTLQSQLQTPSQTPNPIEELT
QSKRNSCGDIQQYLQGSLKALEERYEPMLLALLKRREGTSEALVKARQQAQELRTRRGPL
REEGQRLGLQRACLEERLKLMETHRREDVEQYRETVDRLEETSREQKMELQIQKRKTKEM
EELRDSLTKELYLYRGNVEDDNKNDLTSVKEKT
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccaagagtctaagctgccgatggacccggaaatctgcttcgatccgctgttc
atcgatgaggaagaccagtatggggatgagggtgttgaagaggagaccggcgcttccttc
cagcctctcctgggagttaccagtacaaaaacactcctgactggctcggctcacagtcag
tcctccctgtgggatacctacagggacacacacttggatgagacaaaaacccagttcaag
gaccccatgtttaggagtgtaggtgaaactagagactcctttgggcctcacctattggcg
accgacaccaacacacacctaagtgggttaggacagatccagccacaccttagtgggtta
ggacagatccagccacaccttagtgggttaggacagatccagccacaccttagtgggtta
ggacagatccagccacaccttagtgggttaggacagatccagccacaccttagtgggtta
ggacagatccagccacaccttagtgggttaggacagatccagccacaccttagtgggtta
ggacagatccagccacaccttagtgggttaggacagatccagccacacctgagggagatg
gatgacctgttgaagagttgtgaggacatgacaggcgtgtccttcgactctcagctgtcc
accaggtacacagacacacacctgagtggaccagctcaggaccagaaccagtcggacata
cagaagatggatgccatgatggggagctgtggtgggaatgatagtcccacacgtgccacc
atcctgacctacacagacacacacacggagaaccagtgccaaagtcacctgaaggaggtg
gaatccattttggatcagagtggagccacaggagccgctgtccagcctcagttgcctcct
cttacctccgcaggcactcagctgagtggcactatggctgagtatcagacagagctaatg
gcgatgctggccatgttagagaactgtatggaggaggcagggattacctttgacccttta
gagtggacttaccccagcttacccaaaggatatggccaacccaaccccaacatgaataag
ggaacacaagacagacacgtggagagaggagtagcaatgcaacgacacatggagtctgtg
gggaataccaagactggaggactggagtctgggggatgtgtggatctgaagccatatttg
ggcagtaccttcggccaatttgagcccccaagctaccaagctatctccacagaaagacac
tcagatgagttaggaggctgtggagagacacacacaagaggacacatgtccagggtgtgt
gaagaggacacagaaggacatgtctccggtgtgtctctgggggacacagaggctcacatt
atgtggggccaacaactagagacaggggtgggacgggtggagttgaggggttccgtgcag
gagttggaagtgttggggactgtgctggaggggtgcatcgaggaggtggggaggctggag
aagagacgggatgaactgatgggagagctaaaggcactaagggaggagaagactgggaca
gaggaagggagtgaaggagggcaggcggcacagttaaggcaggtgctgaatattgaggca
gatgggaggagggaggcacgggttaaggagtggcagtctttgagggctgagaggagtgag
gagcagaggaggctgtccagtgtgcgtctggagaggcagggtcttcaggaggagatgagg
aggctaaagaggaggctgttctctgtcgccagggagagtgctcacaaccaggtcatcctg
gcaacccagcagcgtgaggttgcccagctaaacaaagaacagatggaacttgacacactg
atcatccagctgactgaggatgtgtctcagctccgctccacccaccagacccagctctcc
accctgcagtcccagctccagacccccagccagacacccaaccccatagaggagctgacc
cagagcaagaggaactcctgtggggacatacagcagtacctgcaggggagtctcaaggcc
ctggaggaacggtatgagccaatgctgctggccctgttgaagaggagggaggggacatca
gaggccctggtgaaggccaggcagcaggcccaggagctgaggacccgccgggggcccctg
agggaggagggacagaggctggggctgcagagggcctgcctggaggagagactcaaactg
atggagacccacaggagagaggacgtggagcagtacagggagacagtggacaggctggag
gagactagcagagagcagaagatggagctgcagatccagaaaaggaaaaccaaggagatg
gaggaactgagagacagccttactaaagaactctacctgtacagaggcaatgtcgaggac
gataacaagaatgatctaaccagtgtgaaggagaaaacatga
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