Coregonus clupeaformis (lake whitefish): 121586891
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Entry
121586891 CDS
T08357
Name
(RefSeq) vacuolar protein sorting-associated protein 45
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121586891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121586891
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
121586891
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Gene cluster
GFIT
Motif
Pfam:
Sec1
B12-binding
Motif
Other DBs
NCBI-GeneID:
121586891
NCBI-ProteinID:
XP_041759863
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Position
17:44920307..44943750
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AA seq
570 aa
AA seq
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MNVTLAVKQYISKMIENSGPGMKVLLMDKETTSIVSVVYTQSEILQKEVYLFERIDSQNR
DNMKHLKAICFLRPTKENVENLIQELRRPKYSVYFIYFSNVISKSEIKALAEADEQEVVA
EVQEFYGDFIAVNPHLFSLNLSGVARGRSWEPTLLPRTTQGLTSVLLALKKCPMIRYQLS
SDMAKRLGESVKQIITKEYELFDFRKTEVPPLLLILDRSDDAITPLLNQWTYQAMVHELL
GLNNNRIDLSRVPGISKELKEVVLSAENDEFYANNLYLNFGEIGTNIKNLMEDFQKKKPK
EQQKLESISDMKAFVDNYPQFKKMSGTVSKHVTVVGELSRMVSERHLMEVSEVEQELACQ
NDHSSASQNVRRLLQNPRVSELDAVRLVMLYALRYERHSSSILPGLMEELNRKGVSERHR
RMVTSMVEYGGKRVRGSDLINPQDAVAITKQFFKGLKGVENVYTQHAPLLQETLDQLIKG
RLKDSQFPYLGPSSLRDRPQDIIVFVIGGATYEEALAVYNLNRTMPGVRIVLGGTTIHNT
KSFLEEVTLMAGASHGGERVQRAGGHPNRR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgacacttgctgtcaagcagtatatctccaaaatgatagaaaacagcgggcca
gggatgaaggttctgctcatggataaagagacgaccagcatcgtcagtgtggtctacact
caatccgagatcctacagaaggaggtctacttgttcgaaagaatcgactcacagaatcga
gacaacatgaagcacctcaaagccatctgcttcctcaggccaaccaaggagaatgtggaa
aatctgatacaggagctcaggcgaccaaagtacagtgtctacttcatctacttcagcaac
gtcatcagtaagagtgagataaaagccctggccgaggcggatgaacaggaggtggttgca
gaagtgcaggagttctatggagacttcattgctgtaaacccacaccttttctccctcaac
ctcagtggtgtggcaaggggtcgtagctgggagcccactctcctgccacgtaccacccag
ggtctgacctcggtgctgttggccttgaagaaatgtcccatgatccgctaccagctgtcc
tcagacatggccaagagactgggagagagcgtgaagcaaatcatcaccaaggagtatgag
ctgtttgacttcaggaagacagaagtgcctcctctcctgctcatcctggaccgcagcgat
gatgctatcacccctctactcaaccagtggacgtaccaggccatggtgcatgagttgctt
ggcctcaacaacaaccgtattgacttgtcccgagtcccagggatcagcaaggagctgaag
gaggtggtgctgtctgcagagaacgatgagttctatgccaacaatctgtacctgaacttt
ggagagatcggcacaaacatcaagaacctgatggaggactttcagaagaagaagcccaag
gagcaacagaagctggagtccatctctgatatgaaggcgtttgtggacaactacccccag
ttcaaaaagatgtcaggcacagtgtcgaagcacgtgactgtggtgggcgagctgtctcgc
atggtgagcgagaggcacctgatggaggtgtcagaggtggaacaggagctggcctgccag
aatgaccactcaagcgcatcacagaatgtgcgtcggctgctgcagaacccgcgggtgagt
gagctggacgcggtgcgcctggtgatgctgtacgcactgcgctacgagagacacagcagc
agcatcctgccgggcctcatggaggagctcaacaggaagggcgtgtcagagaggcatcgc
aggatggtaacgtccatggtggagtatggaggaaagagggtgagaggaagtgacctcatc
aacccccaagacgcagtcgccatcaccaaacagttcttcaaggggctgaagggagttgag
aatgtgtacacacagcatgcaccgttactgcaggagaccttggaccagctgatcaagggg
cggctgaaggacagtcagttcccctacttaggacccagctcccttagagacaggccacag
gatatcatagtgttcgtcatcggaggggccacctatgaggaggcgctggcggtctacaac
ctgaaccgcaccatgccaggggttcggatcgtactgggcggcaccaccatccacaacacc
aagagcttcctggaggaagtgacattgatggcgggtgcgagccacggcggcgagagggta
cagagggcgggtggtcatcccaacagacgttga
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