Coregonus clupeaformis (lake whitefish): 121586940
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Entry
121586940 CDS
T08357
Name
(RefSeq) aryl hydrocarbon receptor isoform X1
KO
K09093
aryl hydrocarbon receptor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121586940
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
121586940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
bHLH_HIF1A
PAS_4
PAS_9
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
121586940
NCBI-ProteinID:
XP_041759942
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All DBs
Position
17:68768242..68923213
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AA seq
1057 aa
AA seq
DB search
MSTNMYASRKRKKPQRSVKPPPEGAKSNPSKRHRERLNGELDRLASLLPYPQDVISKLDK
LTILRLCVSYLRAKSFFNVTLKSTASQRPESNVLKKQGSELQVPEGELLLQVLNGFALVV
TAGGTIFYASSTIQDYLGFHQSDVVHQSVYDVIHTEDRAELQRQLHWALNPTLTTDTGQL
VSDSASPQAVTVYNPEALPPENSTFLERNFVCRLRCLLDNSTGFLALNIQGRLKFLHGQS
ERTKEGKAIPPQLALFALASPLQTPTILEIRTKNFIFKTKHKLDFTPTACDAKGKIVLGY
TEAELCNRGSGYQFIHAADMLHCAENHMRMIKTGESGMTVFRLLTKLTGWVWVQANARLV
YKNGRPECIIASQRVLTDEEGEDTLRKRSLQLPFSYTTGEALLYDTSFPKTLVTGDSLAG
DTTCPTENTTNNNQDVTLDPDSLLGSLLKQEKSIYYCSPQTQNQHQLQEEVAGLPQEECE
GIFSSSHTQEGSIPSLSETVLFKQEPLGVGGGGGIDGFSSEDRDRDLWSFMRNLGNSRED
LELFQQDEMFLDVDLDAGRDGLLPDLTDEILSYVQESLRKRSDWDQTVFSCRGAKLGDQD
YSCPTTLLHQPSMEQPLATHPHSTTVLLHQPSMEQPLTPHPHSTTVLLHQPSVKQPLTPH
PHSTTVLLHQPSMEQPLTPHPHSTTVLLHQPSMEQPLTPHPHSTTVPQWPPQLPVVHPLS
VHHYQPPPHPQQPIPQQCLHTQPRPQEALQATQQQHRLSQPPQRQQQSHLNGQVLPNQQR
QNNQLYSQSQPFHPQQRQQQLCNRLKHMQVDGTGTGSMTERQKDITKQQQQIPPLFNVEQ
PGGLQTHHSHPQHGHLCLGEASLGLGLHYMNQLNIVSVSRSPELSSYVPTTGLQSQRVDG
ELLPQDLEELLGSLESTGPRGIEDGRGAHQWSVVEALGVFQQQGHLPDGQAQSQATSTGC
AQHAYPLAVGFSRVNRAERPFTAQFQNGSLKEAGPDPGPVPNPGSSRGADPGPVPNPGSS
RGADRGHSAAAGQPTHQPPPPSAESRPYPDLLLRGFM
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccaacatgtatgcaagtcgcaagaggaaaaagccccagagaagtgtgaagcca
cctccagaaggagccaaatcaaacccttccaagaggcaccgggaacgcctgaatggggag
ttggacaggctggccagtctgcttccttacccccaggatgtcatctccaagctggacaaa
ttgaccatcctaaggctttgtgtcagctacctgcgtgccaagagctttttcaatgtgacc
ctaaaatccacagcctcccagcgcccagagagtaatgttctgaagaagcaaggctctgaa
cttcaagttccagagggagagctgttactacaggtgttgaatggctttgctctggtcgtc
acggctggtggcacaatcttctatgcatcctccaccatccaggactacctgggctttcac
cagtcggacgtcgtccatcagagtgtttatgacgtcatccatacggaggaccgagcagag
ttacagagacagctccactgggccctcaaccccaccctcaccactgacactggacagctg
gtctcagattcagcctcgccacaggctgtcacagtctacaacccagaggcactcccacca
gagaattccaccttcctggaacgcaactttgtctgcaggttaagatgtctcctggacaac
tccactggcttcctagccctgaacatccaggggcgtctaaagttcctccatggccagagc
gagaggaccaaggagggcaaggccatcccccctcagctggcgctgttcgctctggcctcg
cccctacagacccccaccatcctggagatccgcaccaagaacttcatcttcaagaccaag
cacaagctggacttcacccccactgcctgcgacgccaaagggaagatagtgctgggctac
actgaggcagagctctgcaaccgtggctcaggataccagttcatccatgctgctgacatg
ctgcactgcgctgagaaccacatgaggatgataaagacaggagagagtgggatgacagtg
ttcaggctgctgaccaagctgacaggctgggtgtgggtgcaggctaatgccagactggtc
tacaagaacggacggcctgagtgtatcatcgcatcccaaagagtcctcacggatgaagag
ggagaggacaccctaaggaagcggagcctccagttacctttcagttacaccactggggag
gcccttctctacgacaccagcttccccaagaccctggtaacaggggactccttagcaggc
gacaccacctgccctacagaaaataccaccaacaacaaccaggacgtaaccctggaccct
gactcactgctgggctctctgctgaaacaggagaagtccatctactactgctcccctcag
actcagaaccagcaccaactccaggaggaggtggcagggcttccacaggaggagtgtgag
ggcatcttctccagcagccacacacaggagggcagcatcccctctctgtcggagactgtc
ctcttcaagcaggagcccttgggggtggggggtggaggggggatcgatggcttctcatca
gaggacagagacagggatttgtggagcttcatgaggaacctgggcaacagtagggaggac
ctggagctgttccagcaggatgagatgttcctcgatgtggatctggacgctggccgagac
ggcctcctccctgacctgacagacgagattctctcctacgtacaggagtctctgaggaag
aggtcggactgggatcagactgtattctcctgcaggggggctaagttaggggatcaggac
tatagctgcccaaccacgctgttacatcaaccatctatggaacaaccactagccacgcat
ccacattctactacagttctgttacaccaaccatctatggaacaaccactgaccccacat
ccacattctactacagttctgttacaccaaccatctgtgaaacaaccactgaccccacat
ccacattctactacagttctgttacaccaaccatctatggaacaaccactgaccccacat
ccacattctactacagttctgttacaccaaccatctatggaacaaccactgaccccacat
ccacattctactacagttcctcagtggccaccccagctgcctgtagtccatcctctatca
gttcaccactatcagcctccaccccacccacagcagccaataccacagcagtgtttacac
acacagccccgcccacaggaagcattgcaggcaacacagcagcagcaccggctgtcccaa
cctccacagcggcagcaacagagccatctaaatggacaggtattgccaaaccaacagcgg
caaaacaaccagctatattcacagtcacagcccttccatccacagcagcgacagcaacaa
ctgtgtaacagactgaagcacatgcaggtggatgggactgggacgggttcaatgacagaa
agacaaaaagacatcaccaagcagcagcagcagattcctccgttgttcaacgtggagcag
ccaggggggctccagactcaccacagccacccccaacatgggcacctctgcctgggggaa
gcttccctgggcctgggcctccactacatgaaccagctgaacattgtgtcggttagccgc
tccccggagctctcctcctatgtacccaccacgggcctccagagccagagggtggacgga
gagctcctgccccaggatttggaggagttgctgggcagcctggagtccactggtccccgg
gggatagaagatggtaggggagcgcaccagtggagtgtggtggaggccctgggtgtgttt
cagcagcaggggcacctccctgacggccaagcccagtctcaggccaccagcacgggctgt
gctcagcacgcctatcccctggctgtggggttcagccgggtcaacagagcagagcggcca
ttcaccgcacagttccagaacgggagcctgaaggaggctggcccagaccctggccctgta
cccaaccctgggtcctctaggggggcagaccctggccctgtacccaaccctgggtcctct
aggggggcagaccgtggacattcagcagcagcggggcagccaacgcaccagcctccccct
ccctccgctgagagcaggccctaccctgacctccttctgaggggattcatgtga
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integrated database retrieval system
