Coregonus clupeaformis (lake whitefish): 121587292
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Entry
121587292 CDS
T08357
Symbol
si:dkey-3h3.3
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121587292 (si:dkey-3h3.3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121587292 (si:dkey-3h3.3)
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121587292 (si:dkey-3h3.3)
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121587292 (si:dkey-3h3.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-C3HC4_3
zf-RING_10
KH_DTX3L
zf-RING_5
zf-C3HC4_4
zf-RING_4
DZR_2
zf-UDP
TRAF3_RING
Zn_ribbon_6
zf-Nse
DUF6036
zf-RING_16
DUF1272
zf-RING_11
NapD
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
121587292
NCBI-ProteinID:
XP_041760139
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MANAPLKEIFSDVTLTVDTDTFKEPNRVKYILSEYDVAVAKASHYEVQGSFEEMEDLFVK
MSSLDRSAAPALRDSPLPHQRRPQSPTPVKPVEVVGAVWDFIQQRCSKELKRIEGEDISI
HKPHDKMVVTFQSHRKDPVRAHFARERFVTFYQRLATDLQVKTYSLDPQYYKSLQRHFPE
LLIEGSPSKDEVTVTGRYMHMVILEDFLWRGSSSAVTSQRPLTPQRVSASGATRNKQSDK
GEEESCPICLDTINDKYKETLECKHSFCRSCLAQAFKTKPVCPTCGAVYGQLKGTQPKGG
TMTVTKERSSLSGYENYGTIVIQYLIPSGTQKEEHPNPGQTYQGASRTAYLPDSSEGRNV
LALLKRAFDQRLTFTVGRSSTTGVENVVTWNDIHHKTSKYGGTSCYGYPDPDYLSRVQDE
LKVKGIY
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgcgccattgaaagagatattttcagatgttactctcactgtagatacagac
actttcaaagagcctaacagagtgaagtacattctctctgaatatgatgtcgccgttgca
aaagcctcacattacgaagtgcagggatcatttgaggaaatggaggacctgtttgtgaag
atgtcaagtctagacagatctgctgcccccgctctcagagacagtcctcttcctcaccaa
cggcgtcctcagtcacctactccagtgaaaccagtggaggtagttggggccgtttgggac
tttatccaacagagatgctcaaaggagttgaagagaatcgaaggggaagacatctcaatt
cataaacctcatgacaaaatggtggtgacctttcaaagccacagaaaagatccggttcgg
gctcacttcgccagagagcgctttgtcacgttctatcagagactcgccacagatctgcaa
gtgaagacttacagtttggatccacaatactacaaaagcttgcagagacattttccagaa
cttttgattgaaggaagccccagtaaagacgaagttacagtgacagggcgctacatgcat
atggtgatattggaggattttctatggcgcggttccagttccgccgtgacatcacaacga
cccctgacaccccagagagttagcgcctctggtgctacacgaaacaagcagtcagacaaa
ggagaagaagagtcgtgtccgatttgtctggacaccattaacgataaatacaaggagacg
ttggaatgtaaacactcgttctgtagaagctgtctggcgcaggcgttcaagaccaaacct
gtctgtccaacctgtggggcagtctatgggcaattgaaggggacgcaaccaaagggcggt
actatgactgtcactaaggaaaggtcttctttgtctggatatgagaattatggaacaatc
gtgattcagtacctcattccaagtggaacacagaaggaggagcatcccaacccaggtcag
acttaccagggtgcatcacgtacagcgtatctcccagactcctcggagggcaggaatgtt
ctggcgctcctgaagagggccttcgaccagcgactcacgttcactgttggccgatcttcc
accacaggcgtggaaaacgtcgtcacgtggaacgatatccaccacaaaacctcaaaatac
ggaggcaccagttgctatggttaccctgaccctgactacctgagccgtgtacaggatgaa
ctgaaggtcaaaggaatctattga
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integrated database retrieval system
