Coregonus clupeaformis (lake whitefish): 121587315
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Entry
121587315 CDS
T08357
Symbol
ndr2
Name
(RefSeq) nodal-related 2
KO
K04666
nodal
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121587315 (ndr2)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121587315 (ndr2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121587315 (ndr2)
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Transforming growth factors (RSTK binding)
121587315 (ndr2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
DUF4734
PIP5K
Motif
Other DBs
NCBI-GeneID:
121587315
NCBI-ProteinID:
XP_041760159
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Position
31:complement(46092274..46097806)
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AA seq
404 aa
AA seq
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MHSFGALGVALHASLLILLAQGIHKSRDGVYHGVSRRFAVDHRSPGYHHLAPTYMMHLYR
NYKSNLTRPIDVMEQTTAKQADTVKSVMAKSLSHRHRRWTATFDLTTLLADDQIQAAELR
FRFPRATRAFNITVEIYHHHDYPCRQTQGICQEHQLVGYLSVSSVITSSQHWKVYNLTGP
LLNWLGQKQVSRSSRKRRSPNKTKRDVFFPNPVQLAGTQQSQRVSDRALLVVFSHTGSEE
GSQAKASLLHTAEQSKFLSTTEPKKVRRPKRHRTKRGHSGQRDPPAMRGPEVSSRNNEID
PSLCRRVDMHVDFNQIGWGSWIVFPKKYNAYRCEGICPSPLGEDLNPTNHAYMQSLLKHY
QPERLPSACCAPTKTSPLSMLYYENGEMLLRHHEDMTVDECGCL
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcattctttcggcgctctaggtgtagcgcttcatgcctctctgctcatactgctggct
caaggaattcacaaatctagagatggagtttatcacggcgtatcacgacgttttgctgta
gaccaccgttcacctggataccatcacctggcaccgacgtatatgatgcacctttaccgg
aattacaagtcaaatctcactcggcctatagatgtaatggagcagaccaccgcaaaacaa
gcagacacagtcaagagtgtgatggcaaaaagtttgtctcacagacaccgacgctggact
gcaacctttgacctaaccaccttattggccgacgaccagatccaagctgcggagctcagg
ttcaggtttccccgagcgacgagggctttcaacattaccgtggagatctaccatcaccac
gactacccgtgcaggcagacacaggggatctgccaggaacaccagctggtgggatatctc
tctgtctcctctgtgatcacctcctctcagcactggaaggtttacaacctcactggtcca
ctgttgaactggctcggccagaaacaggtctccaggagctcaaggaagaggagatcacca
aacaagacaaagagagatgtgttcttccccaaccctgtccagttggctggaacacagcag
agtcagcgtgtgagcgacagagccttgctggttgtcttctctcatacagggtcagaggag
ggctcccaggccaaggctagcctcctccacacggccgaacagtccaagttcctgtccacc
accgagcccaagaaggtccgcaggccgaagagacacaggacaaaaaggggccactcaggc
cagagggatccaccggccatgagaggtccagaggtgtccagcagaaacaatgagattgac
ccgtcgctctgtcgaagagttgatatgcatgtagacttcaatcagataggctgggggtcc
tggatcgtcttcccaaagaagtataatgcctatcgatgtgaggggatctgtccaagtcct
ctgggagaagacttgaacccaacaaatcatgcttacatgcagagtctactaaaacactac
cagcctgagcggcttccctctgcgtgttgcgcccccaccaagacgagtcctctgagcatg
ctgtattatgagaatggagaaatgctgcttcgccatcacgaggacatgactgtggatgaa
tgtggctgcctgtag
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