Coregonus clupeaformis (lake whitefish): 121587410 Help Entry 121587410         CDS       T08357                                  Name (RefSeq) synaptopodin   KO K21112   synaptopodin Organism cclu  Coregonus clupeaformis (lake whitefish) Pathway cclu04530   Tight junction Brite KEGG Orthology (KO) [BR:cclu00001]  09140 Cellular Processes   09144 Cellular community - eukaryotes    04530 Tight junction     121587410 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Calsarcin Motif Other DBs NCBI-GeneID:  121587410 NCBI-ProteinID:  XP_041760232 LinkDB All DBs Position 2:complement(13674151..13724804) Genome browser AA seq 1173 aa AA seqDB search MELEMERSHMSVRRGVSWSPGVGRKTLQVGHGVNMDTSNRESDASWERRDYGGIKGQVTS TSTSQLSRKTNLTRSASLSEKELKEARVRSQIIAAQLTVPSGCSNSRGVQLFNRRKKRVN AFTLDSCGERRREEEREEREEREGDNRNNNLTWEEEKGGPSEGTETDGQLNWKNSIGIKP PLWSPPSGSEVTGSDIMEDPGNEHIYKGVDVIQERHFQPVNERQGEAEERSGEREREEIY EDIEGEVKDEIIPVNDNNTGPVREEVGMNRGSYTYPTAPPETHNGFHSTQGSAGEIKNGG PVSMSLSRQTPTIVNRTARPFFSPPTVQPKSPEARSPVMDNNIPPAPSYPTPTLPPAPSY STPPLPPFTATRPVAFSPPPPPPSYSMPPLPAFPIHPPPPSQSLSSPPPMSTVMFPRSTP IPQYNPPPTAAPVPQYLPPNPPVTQYIPPPTSPRPNIFVPFTPQPIGQQNQQQPIKTGIL EEGAAAIRRSSTARKSMFTFKEKPVMAPNPELLSLVQGNDDRKKHGLRSVPDPAPEEELL ALGAEASNFLAREELKAEAAKVPEWSSCLKSSRTREPRGQHQPEQTLTNASGKGAELFAK RQSRMEKYVVENQNVSGGGGGQMRSPSPTASLPPSWVYPSNMPGRVKAIANNTDLSARLT QTLQTPQPGNRRPSQQAPTPAPVPEEPPLENGCTKIEMDLSRHQPYQLNSSLFIFNPVQD STSTLLSALPRGAPPTPKPLVSSEAYSRQASLPSSNPPSHNYNSLPRFRPTQSPSLQPPS GGIGGGDYYPPQHGGTPQLRDPRITSPVSAFSPERVASPRSGVQAPRPTFSTKRAGIEPQ MRKESPRTPTPTTTPTTTPSPTRTPQFPRRFSSPEGPPTHSGVWSTTPQTTITPSSSSSS RHLHQATATSTATSPVSPPWETRCKSPAVVNQTTKPFSTASLSRPKPSTTTSPISPRSPW GSRCQSPNINQTTKPFSTTISNSSSSRPSHPGTITTPLSPSPLSPPWGSRCQSPIVSPSP SPSPSHSKANHRLLAKNIINAAKRKNSPSPGALSGHNLPISPLGGNPTHQHHQGYDSQHH HSSSSSKPPFSPYQSRAMGCQSPPFASPPPTPTGVIRSPVRLYNTRSLTDSDASVESEDS GLRSPGLQRTQNTCPRGWGGSLRVKRGSVGTDL NT seq 3522 nt NT seq  +upstreamnt  +downstreamnt atggagttggagatggagaggagtcatatgtctgtgaggagaggggtaagctggagccca ggtgttgggaggaagacccttcaggtggggcatggcgtgaacatggacaccagcaacaga gagagtgatgcatcttgggagaggcgggactacggagggatcaaaggacaggtgacatcg acctccaccagtcagctgtctcggaaaaccaacctgacacgtagtgccagcctatcagaa aaggagttgaaggaggcgagggtgaggtcacagatcatcgcggcccagctgaccgtcccg tctggctgctccaactctcgcggcgtccagctcttcaaccgccgcaagaagagggtcaac gccttcacgctagatagctgtggggaacgaaggagggaagaggagagagaggagagagaa gagagagaaggagataacaggaacaacaacctgacatgggaggaggagaaggggggtcct agtgaggggacagagacagacggacaattgaactggaagaacagcatcgggataaaacca ccactctggtcaccaccctctggaagtgaggtcacaggaagtgacatcatggaggaccca ggtaatgagcacatctacaagggagtggacgtgatacaagagagacacttccagccggtg aacgagagacaaggggaggcggaagagaggagtggagagagagaaagagaggagatatat gaggatattgagggtgaagtgaaggatgagattataccagtaaatgacaacaacactggt ccagtcagagaggaagtggggatgaatagggggtcatacacataccccacagctccccct gagacccataatggcttccacagcacccagggctctgctggagagatcaaaaatggcggg ccagtttctatgtccctgtccagacagacccccaccatcgtcaaccggacagccagaccc ttcttctccccacccaccgtacagcccaagtccccagaggcaaggagtcccgtcatggat aacaacatacccccagccccctcctatcctacccccacccttcccccagctccctcctac tccactccccctctgcctcctttcaccgccactcgccctgtcgccttctctcctcctccc cctcctccctcatactctatgcctccactcccagccttccccatccatcctcctcctccc tcccagtctctctccagtcctccccccatgtctaccgtcatgtttcctaggtctacaccc atcccccagtacaaccctcctcctacagctgccccagtgccccagtatctaccccccaac cctcctgtcacccaatacatccctcctcctacctcccctagacccaacatctttgtcccc ttcacccctcagcctattggccaacagaaccagcagcagccaatcaaaacgggcatcctg gaggaaggggcggcggccatcagacgatcgtctacagccaggaagtccatgttcaccttt aaggagaagcctgtcatggcacccaaccctgaactcctctccctggtccaggggaatgat gataggaagaagcacggcctccgctccgttcccgacccagccccagaggaggagctgctg gctctgggggccgaggcctctaacttcctagccagggaagagttgaaggcggaggctgcc aaggtgccggagtggtcctcctgtctcaagagctccaggaccagggagcccagagggcag caccagccagagcagaccctgaccaacgcatcagggaagggggccgagctgttcgcgaag cgccagtccaggatggagaagtacgtagtggagaatcagaatgtctccggtggtggaggt ggtcagatgaggtctccgtctccaaccgcgtctctgccgccgtcttgggtctacccatct aatatgcctggccgggtcaaagctatcgctaacaacactgacctcagcgccaggctgacc cagaccctccagacccctcagcctgggaacaggaggcccagccagcaggctccaaccccg gccccggtccccgaggaaccacccctggagaacggctgcaccaagatagagatggacctc tccaggcaccagccctaccagctcaactcctccctgttcatcttcaacccagtccaggac tctaccagcaccctgctgagcgctctgccccggggggccccgccaacacccaaacccctg gtctcatctgaggcttactccaggcaggcctccctgccctcctccaaccctccatcacac aactacaacagcctgccccgcttcaggcctacccagtccccatcacttcagcccccatca ggaggaattggaggtggggattactatcctccacaacacggggggactccacagctgagg gaccccaggatcacctctcctgtctctgccttctctccggagagagtcgcctctcctcgg tcgggcgtccaggcacccagacccaccttctctaccaagagggcagggatcgaaccccag atgaggaaggagtccccccgaaccccgacccccaccaccacccccacgaccaccccctct cccaccaggacaccgcagttcccccgtcggttcagcagcccagagggaccccccactcac agtggggtctggtccaccaccccccagaccaccatcaccccctcctcctcctcctcttcc aggcacctccaccaggcgactgccacctccacagccacctcccctgtctccccaccctgg gagacgaggtgcaagtcccccgccgtggtcaaccagaccaccaaaccgttctccacagcc tctttatccaggcctaaaccatccactaccacctcacctatatcgcctagatctccctgg gggtcccgctgtcaatcccctaacatcaaccagacaaccaagcctttctccaccaccatc tccaactcttcctcctccagaccctctcacccaggcaccatcacgactcctctctccccc tcacccctgtcccctccctggggttccagatgccagtctcccatcgtcagccccagcccc agccccagccccagccactccaaggcaaaccaccgcctgttagccaagaacatcatcaat gcggccaaacgtaaaaacagcccgtccccaggtgctctgagcggccacaatctcccaatc tccccactaggtggcaacccgacccaccagcatcaccagggctacgactcccagcaccac cacagcagcagcagctccaaaccacccttcagcccctaccagtccagggccatggggtgc cagtctccccccttcgccagccctcctcccacccctacaggggtaatccggtccccggta aggctctacaacaccaggtccctcactgactcggatgcttcggtggagtcggaggactct gggctgaggtctccaggactgcagcgtacccagaacacctgtccccggggctggggcggc agcctgagggtgaagaggggcagtgttggcaccgacctatag

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