Coregonus clupeaformis (lake whitefish): 121587428
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Entry
121587428 CDS
T08357
Symbol
slc1a8b
Name
(RefSeq) solute carrier family 1 member 8b
KO
K05618
solute carrier family 1 (glutamate transporter), member 7
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121587428 (slc1a8b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121587428 (slc1a8b)
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
121587428 (slc1a8b)
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GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
121587428
NCBI-ProteinID:
XP_041760241
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Position
26:complement(49287765..49305367)
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AA seq
551 aa
AA seq
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MECIKHIIKSMVSVKVWAYIKDYCKRNGLLTLSVIAVVSGCVLGFSLRSLNLSTQAKIYF
SFPGELLMRMLKMLILPLITSSLMSGLSAMDTKASGRLGVLTITYYLWTTFIAVIVGIIL
VLVIHPGTGTEKDGHRGGSGPVMTSADALLDLIRNMIPSNLIEATFQQYRTDLVPIVASS
VVESQANYVYVMPDHNNPQLGHPVFLEITPAPDIKYKIVPGHSSGMNVLGIVIFSATMGL
LLGKMGERGAPLVNVCQCVNECVMKIITAAMWYFPFGIVFLVAGKILDMHDPAHLGEKLG
MYFITVLAGLFVHGLILLPLFYFIITRKNPFTYIRGLLQALVIALATSSSSATLPITMKC
LLENCGVDRQIARFVLPVGATINMDGTALYEAVAAIFIAQVNEYELDFGQLVTISITATA
ASIGAAGIPQAGLVTMVIVLTSVGLPPADITLIVAIDWVLDRFRTMINVLGDALAAGIMC
HLCKKDFERRESTSNSGRRDTLISFGGQSVQSCALSEAPLMDYAHRCDYVYEVEGDCVTE
RSGPTYNLCQV
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggagtgcataaagcacattattaagagcatggtctctgtgaaggtgtgggcgtacatc
aaggactactgtaaacgcaacgggctgctgacgctctcggtcatcgccgtggtttctggc
tgtgtgctcggcttctccctccgcagtttaaacctctccacgcaggctaagatctacttc
tcattccctggagaactgctgatgaggatgttgaagatgctgatcctgcctctcatcaca
tccagtctgatgtcggggctgtcagccatggacactaaggccagtggacggctgggggtc
cttaccatcacctactacctgtggaccaccttcatcgccgtcatcgttggcatcatcctg
gtgctggtcatccaccctggtacgggcacagagaaggacgggcacagaggagggtcaggg
cccgtcatgacttctgctgacgctctgctggacctcatcaggaacatgattccctccaat
ctgatagaggcaacttttcaacagtaccgtacagacctggtgcccattgtggcctccagt
gtggtagagtcccaggccaactacgtctacgtgatgcccgaccacaacaaccctcagctg
ggccaccctgtcttcctggagatcaccccagctccagacatcaagtacaagattgtccct
ggccacagctctggcatgaacgtactagggattgtcatattctctgctactatgggcctg
ctcctggggaagatgggagagagaggtgctccactggtcaatgtgtgtcagtgtgtcaac
gagtgtgttatgaagatcatcactgctgccatgtggtatttcccgttcggcattgtgttc
ctggtagcggggaagatcctggacatgcatgaccccgcccacctgggagagaagctgggg
atgtacttcatcacagtgttagccggcctgtttgtccacggactcatcctgctgccgctc
ttctactttataatcacacgcaaaaacccattcacctacatcagaggcctgctacaggct
ctggtcatcgccctggcaacctcctccagttccgccaccctgcccatcaccatgaagtgt
ctgttggagaactgtggagtggacagacagattgccaggtttgtccttccagtgggagcc
accatcaacatggacgggacagccctctacgaggccgtggcagccatttttatcgcgcag
gtcaacgagtacgaactagactttggtcagctggtcaccatcagtatcacagcgacagca
gccagtatcggggctgctgggattccgcaggcaggtctggttaccatggtgatcgtcttg
acctccgtggggctgccgcccgctgacatcacactgatcgtggccattgactgggtcctg
gatcgtttccggaccatgatcaatgtgttgggagacgccctggctgcaggcatcatgtgt
cacctctgtaagaaggattttgagaggagggagtcaacctctaactccggccggagggac
acactgatctccttcggtggccagagtgtccagagttgtgccctgtccgaggctcctctc
atggactatgcccatcgctgtgactatgtctacgaggtggaaggtgactgtgtcacagag
agatctggccccacctacaacctgtgtcaggtttag
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