Coregonus clupeaformis (lake whitefish): 121587431
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Entry
121587431 CDS
T08357
Symbol
pld1a
Name
(RefSeq) phospholipase D1a
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00564
Glycerophospholipid metabolism
cclu00565
Ether lipid metabolism
cclu01100
Metabolic pathways
cclu04144
Endocytosis
cclu04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
121587431 (pld1a)
00565 Ether lipid metabolism
121587431 (pld1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121587431 (pld1a)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
121587431 (pld1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121587431 (pld1a)
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
121587431 (pld1a)
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
121587431 (pld1a)
Endosome - Golgi transport
Others
Others
121587431 (pld1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc
PLDc_2
PX
PH
Motif
Other DBs
NCBI-GeneID:
121587431
NCBI-ProteinID:
XP_045063841
LinkDB
All DBs
Position
26:49244900..49272553
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AA seq
1058 aa
AA seq
DB search
MLGKDPPTTSSLTLMTSDPSDITVEPSDISRKMSGVVESLDTRELDMGDGEETDNDPNTI
GDSHIGFSAVYHTVGFKESEARVYLPTVPITAKILEVERFNTAQDRFNITAQRSVNKSQP
AVFKIELRHGEFSWVVKRKEKHFMELHRELVRYKMFIRVPLPSRSHTTRRRTMKKSEARQ
MPELPRCRDELAQDEQVYSRRKQLEDYLNKLLRMAIYRKYYHTMEFIDVSQMSFIHDLGP
KGLEGMIHKRSGGHRIPGLNCCGHSEVCYRWSKRWLVVKDSFLFYMKPDSGAVSFVLLLD
KEFSIKMDSKDTETKHGVRIDSLSRCLVLKLNSYRHARWWGQAIEDFVRKHGRAFLRDHR
FGSFAQEEQNIPAKWYVNGKTYMEDVADALEEAKEEIFITDWWLSPEIFLKRPVVEGNKW
RLDCILKRKAQQGVHIFVMLYKEVELALGINSEYSKRTLIHLHPNIKVMRHPDHVSSSVY
LWAHHEKIIVIDQSVAFVGGIDLAYGRWDDREHRLTDVGSVTRSVALEMEQPQSSAHHPS
SRGVSSTDGAANSNGGNQSLPGNPGVELPRLKGIGRTRKMHFSLVKHLHKHSLQHADSIS
SLDSAGSGSVRSLQTGVGELKGDTRFWHGKDYCNFVYKDWIQLEKPFDDFIDRYTTPRMP
WHDISSVVHGKAARDVARHFIQRWNFCKIMKPKYHSLSYPYLLPKSHSTASELRYQVPDC
VPTRVQVLRSAADWSAGIKYHEESIHNAYLQTIARSKHFIYIENQFFISCADNKMVHNKI
GEALIERILRAHKEGKKFRVYVVTPLLPGFEGDITTGGGNALQAVMHFNYRTMIRGEYSI
ISQLKKEMDELQWMNYISFCGLRTHAELEGRLVTELIYVHSKMLITDDNTVIIGSANIND
RSMLGKRDSEVAVIIEDSETVTAVMDGQEYQAGRYALALRLECFRTILGAHMDTTIDVSD
PVSDRFYKDVWMTTAGRNATIYEKVFRCLPSSLVRNMSELESYQTNPGLAQSDPGKAQEE
LRRTRGFLVQFPLDFLSEQNLMPSVGTKEGMVPTEIWT
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgctgggtaaagacccccccaccaccagcagccttaccctgatgacctctgacccctct
gacatcactgtggaacccagtgacatcagcaggaagatgtcgggcgtagttgagagtttg
gacaccagagagttggacatgggagatggagaggagactgacaatgaccctaacacaata
ggggacagtcatatagggttcagtgctgtgtatcacacagtgggttttaaggagtctgaa
gccagagtctatctccctactgttcccatcactgctaagatcctggaggtggagaggttc
aatacagctcaggacaggttcaacatcacggcacagaggagcgtcaacaagagtcagcct
gcggtgtttaagattgagctgagacatggagagttcagctgggtggtcaagagaaaggag
aaacacttcatggaactccacagagaactggtccgatacaagatgttcataagggtaccg
ctaccctcccgaagccacacaacgaggaggaggacaatgaagaagagtgaagccagacag
atgcctgagctgccgcgttgcagagatgagttggcacaagacgaacaggtctacagcagg
aggaaacaactggaagattatctgaacaagctgctaaggatggccatatacaggaaatac
taccacactatggagttcatagacgtcagccagatgtccttcatccatgacctgggacct
aaaggactggaggggatgatacataagcgttctggaggtcatcgtatcccaggcttgaac
tgctgtggtcacagtgaagtctgctaccgctggtctaaacgctggttggtggtgaaggat
tcgttcctcttctacatgaagccagactcaggagctgtttcctttgttctcctgttggac
aaagagttcagcatcaaaatggactccaaagacacagagaccaaacatggagtacgcatc
gacagcctctccaggtgccttgtactgaagttgaacagctacagacatgctcggtggtgg
ggccaggcgatagaagactttgtccgtaaacacgggagggcgtttctacgagaccatcga
tttggttccttcgctcaggaggagcagaacatccctgccaaatggtatgtgaatgggaag
acctacatggaggacgtggccgatgctctggaagaggctaaagaagagatcttcatcact
gactggtggttgagtccagagatcttcctgaagaggccagttgtggagggaaacaaatgg
agactggactgcatcctcaaacgcaaagcacaacagggggttcacatttttgtgatgctg
tataaggaggtggagctagctctgggcatcaacagtgaatacagcaagagaacattaata
cacctgcaccccaacatcaaggtgatgcgccacccggaccatgtgtcgtcgtctgtgtac
ctgtgggcgcatcacgagaagatcatcgtcatcgaccaatcagtggccttcgttggcggg
attgacctggcgtacggtcgctgggatgaccgagagcatcgcctgacagacgtggggagt
gtgacacgctctgttgccctggagatggagcagcctcagagctccgcccaccatccctcc
agtaggggagtgtcctctaccgatggtgccgccaatagcaacggaggcaaccaatcactg
cctggcaacccaggggtggagcttccacggctgaaggggattggtcgaaccaggaagatg
cacttctccctggtcaaacacctccacaaacactctctgcagcatgcagacagcatcagc
tccctggacagcgctggcagtggttcagtgcgaagcctccagacaggtgtaggagagctg
aagggtgacaccaggttctggcacggaaaagactattgcaactttgtctacaaggactgg
atacagctggagaaaccctttgacgacttcattgacaggtacaccactcccaggatgccg
tggcatgacatctcctctgtggtccatgggaaggctgccagggacgtggccagacacttc
atacagcgctggaacttctgtaagataatgaagcctaagtatcattctctctcctacccg
tacctcctgcccaagtctcacagcactgccagcgagctgaggtaccaggtgcccgactgt
gttcccactagagtacaggtgttgcggtcagcagcagactggtcagcaggtattaagtac
catgaggagtccatccacaacgcctacctccagaccatcgccaggagcaagcacttcatc
tacatagagaaccagtttttcatcagttgtgctgacaacaagatggtccataacaagatc
ggagaagcgctcatcgagaggatcctcagagctcacaaggaaggcaagaagttccgtgtg
tacgtggtgactccactacttcctgggtttgaaggtgacatcacaacagggggaggaaac
gccctccaggccgtcatgcacttcaactacaggaccatgatcagaggtgaatactccatc
atctcccagctgaagaaagaaatggatgagctccagtggatgaactacatctcgttctgt
ggtctgaggacccacgctgaactggagggacgcctggtcacagagctcatctacgtccac
agcaagatgctcatcacagatgacaacaccgtcatcataggttcggccaacatcaacgac
cgcagcatgttggggaagcgtgacagcgaggtggcggtgatcattgaggactctgagacc
gttaccgcggtgatggacggacaggagtaccaggctggacgttacgcactggcgctacgt
ctagagtgtttcaggactatccttggagctcatatggacacgaccattgatgtgtctgac
cctgtctctgaccgcttctataaggatgtctggatgacaaccgctggacgcaacgcaacc
atctatgagaaggtgttccggtgcctgccgtcctccctggttcgtaacatgtctgagtta
gagagttaccagacaaacccaggcctggcccagtctgacccaggtaaagcccaggaggag
ctaaggaggaccagagggttcctggttcaattccctctggacttcctctcagaacagaac
ctaatgccttctgttgggaccaaagagggcatggtgcctactgagatctggacctag
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