Coregonus clupeaformis (lake whitefish): 121587434
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Entry
121587434 CDS
T08357
Symbol
ppp2r3a
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03015
mRNA surveillance pathway
cclu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121587434 (ppp2r3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121587434 (ppp2r3a)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121587434 (ppp2r3a)
03036 Chromosome and associated proteins [BR:
cclu03036
]
121587434 (ppp2r3a)
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121587434 (ppp2r3a)
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121587434 (ppp2r3a)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121587434 (ppp2r3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
P2R3B_EF-hand
EF-hand_7
EF-hand_5
EF-hand_6
EF-hand_1
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
121587434
NCBI-ProteinID:
XP_041760254
LinkDB
All DBs
Position
26:49088704..49127439
Genome browser
AA seq
1459 aa
AA seq
DB search
MAAAYRVVVSSVSCYSSVVVDRRAQSHAVHYCSGSCGALSQGLDCTVAHRSTCSELLTAP
EHTHTHTHPDPSHRFTHNLTRNANSPHQNFNTCKLSITSSNGSIGVPNDPLSNSVYGVVG
EDSPPWRGKKNNTTTSSSPDRPLQSSASLKDITGEAINLASGKLKEFSFEKLRLSTSHVT
FRKGRKVRPDSYSRRSTDLDIVYGHFTGNVGGTGNGTITGNGNANDENLPPFSDTPKVLK
GLSPASITAGGGSLSSTSLSSVSRGGSTGSLSSACSGSLEAGLNTVASLYLSSLADESLI
ARLLEKTRAGEEGGVGGAGGEDIRACLDILVKCSEDLKKCTDIIKQCISRKSPGGGEDGG
ASPESIYRAVMTRLSSYLKKLPLELEGAGLGLGSGAGGQGSGIGGHSELAELVSSLHMLQ
QAAVPFSPIFGNDQPPRYEDVVQNPPLPKSKAILASSSIAPDSSLSLSTTPETAGRHKVQ
TNGLQHTHSPSPHTHTLSISTPPSQAHTPSSQTHTPSARAPTPSISPMEALFIEEDADLG
RGLNRTSRHTHSHTPTRSLTHTHSRNGTAFSPHTPPSSAHTHLSPNLPHAHFTHTLQSTG
EALTSPPTSKHTAPVTHKDDDIDKLLMDLECLSQSMGRERDRIREGESEREREPPLPAKT
RQRGTGQGITSPQTQPSLQTQTQINPQAQRPVPVSHLTANAQATRSTPSSPAPLPKAEGS
VVGLGDEEDGALLLRILESIESFAQELVDSGGSPGNTGKTGAQSKEKEVMRLLQDNLATA
AKTDTMTQTQAKLPLSPPAGQDGPVSTPVHVAASTPAPRPTAGAVSVALPVSTAPTPVPV
PVPKPVPAHIPTTLAESSALPTPVPPPTVVPTPSEAATVGLLEATTLERTPIEGPTAELT
AGLTTKATPPPAVTPLPSPVPPPTPTPAEAPVATIAAPVAVRHPVAPSDAVALRDIGSTL
LIQQTPEVIRVQSNKQDKKPGTPPPAPLSPTPSIPPPHHSPSPPPTPVVLTPPPPPPSPP
PALNIPRFYYPRGLPGATKVNHDAAITAIETAFTEFEEEKADIYEMGKIAKACGCPLYWK
APMFNGAGGERTGFVSVHSFIATWRKLLHSCYDDSSKFIYLLAKPGCTYLDQEDFIPLLQ
DIVDTHPGLTFLKDAPEFHSRYITTVIQRIFYVVNRSWTGRITMTELRRSNFLQTLALLE
EEDDINQITDYFSYEHFYVIYCKFWELDTDHDLYIDPKDLARYNDHASSSRIIERLFSGA
VTRGSSVQREGRMSYAEFTWFLISEEDKKNPTSIEYWFRCMDTDGDGVLSMFELEYFYEE
QCSRMEGMGIEPLPFTDLLCQMLDLVKPESQGKITLSDLKRCRMAHIFFDTFFNLEKYLD
HEQRDPFALQKDIDNECPEPSDWDKYASEEYEILVAEETANEQLQEGTFDDDYEEAELPV
QGEMIGNKMDKLLISDLTA
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcctatcgcgtggtagtgagcagtgttagttgctatagcagcgtggtggtg
gatcgtcgggctcagagtcacgcggtgcactactgctccgggtcatgtggggcgctgtcc
cagggactggactgtactgtagcccaccgcagcacctgctccgagctgctgaccgccccc
gaacacacacacactcacacacaccccgacccctcacacagattcacacacaacctgacc
cgaaacgctaactctcctcaccaaaacttcaacacctgtaaacttagtatcaccagctct
aacgggagtattggtgttcctaatgatcccctctctaacagtgtttatggtgtggttggt
gaggacagtcctccatggcgaggtaagaagaacaacactactaccagctctagtcctgac
cggcctctccagagctctgccagtctgaaggacatcacaggagaagccatcaacctggcc
agtggcaaactcaaagagttctccttcgagaagctccgcctctccaccagtcacgtgacc
ttcaggaaaggtcgcaaggtcaggccggactcctacagccgtcggtccacggacctcgac
atcgtctatggacacttcaccgggaacgtcggaggaaccgggaatgggactattaccgga
aatggaaacgccaatgatgagaacctgccgcctttcagcgacacccccaaggtgctcaaa
ggcctatcgcctgctagcatcaccgccgggggcgggtctctatcctcaaccagcctatcc
agcgtctccaggggcgggtccaccggtagcctatccagcgcctgctccggttccttggag
gcggggctaaacacagtggcgtctctctacctcagctcattggccgacgagtccctcatc
gcccggttactggagaagacccgtgcaggggaggagggaggagtgggaggagcagggggg
gaggacatacgtgcctgtctggacattctggtcaagtgttctgaggacttgaagaaatgt
acggacatcatcaagcagtgtatcagtcggaagagtcccgggggaggggaagatggggga
gccagccctgagagcatctacagagctgtaatgaccagactgagctcctacctgaagaaa
ctgcctctagagctggagggggctgggttagggttagggtcaggggctggaggtcaaggg
tcagggattggaggtcatagcgagttggccgagctggttagtagtctgcatatgctgcag
caagctgctgtccccttctcacccatatttgggaatgatcaaccgccacggtatgaagac
gttgttcagaatcctcccttacccaagagcaaggctatactggcatcctcatccatcgct
ccagactcctctctctctttgtccactacacctgagacagcagggagacataaggttcag
accaacgggctgcagcacacacactctccctcaccgcatacacacacattgtccatttct
acccctccatcccaggcacacacaccttcatcacaaacacacactccgtcagcgcgtgca
cccactccgtccatctcccccatggaggctctctttattgaggaggatgcagacctggga
agggggctgaacaggacttccagacacacacactcacacacaccgaccagaagcctcaca
cacactcacagtcggaacgggacagcttttagtccacacacaccccccagctccgcacac
acacacctcagccccaatctgccacacgcacactttacacacacactccagtccaccggt
gaagcactcacctcccccccaacctccaaacacaccgctcctgtcactcataaagacgac
gacatcgacaaacttctgatggacttggagtgtctgtcacaaagcatgggtcgggagaga
gacagaatcagagagggagagagcgaaagagagagggagcctcctctccccgctaagacc
agacagagggggacaggacaggggatcacctccccacaaacccaaccctctctccagaca
caaacccaaatcaacccccaggctcaaaggcctgttcctgttagccacctaaccgctaac
gcccaggccactaggtcgacccccagctcgcctgctcctctccccaaggcagagggcagc
gtggtggggctgggagatgaggaggacggggccctgctgctgaggatactggagagcatt
gagagctttgcccaggagctggtggactctgggggtagtcctgggaacaccgggaagact
ggggctcagagcaaagagaaggaggtgatgagactcctacaggacaatctggctactgca
gcgaagactgacactatgacacagacacaggccaaactaccgttatctccaccagctggt
caagatggacctgtatccacacctgtacatgtggctgcctccacacctgcaccaagacct
acagctggagctgtttctgtggctttacctgtctctacagctcccacacctgtccctgtc
cctgtccccaaacctgtccctgcccatatccccacaaccctagcagagtcttctgccctg
cccacacctgttccaccacctacagtcgtacccacaccttcagaagcggctacagttgga
ctgttagaggccactacactcgaacgtacacctatagaaggtcctacagctgaactgaca
gctggacttaccaccaaggccacccctccaccggctgtaacacctctcccctcccctgtc
ccgccccctacacccacacctgcagaggcacctgttgctaccatcgctgctcctgttgcc
gtgagacacccggttgcccctagcgacgcggttgccctgagagacatcggctcgacgctg
ctcatccagcagacgcccgaggtgatcagagtccagtccaacaagcaagataagaaacct
ggcacacctcctccagcccctctctcccccaccccctccattcctcccccccaccactcc
ccctctcctccccccaccccagtcgtcctcacccctcctcccccacctccctctcctccc
cctgccctcaacattccccgcttctactacccccgagggttaccaggggcaacaaaagtc
aaccacgatgcagccatcactgccatagaaacagccttcacagagtttgaggaggagaag
gctgatatctacgagatgggcaagatcgctaaggcatgcggctgtcctctgtactggaag
gcccccatgtttaacggagcgggaggagagaggaccggcttcgtctctgttcactccttc
attgctacctggagaaagttgttacacagttgctatgacgattcgtctaagtttatctac
ctcctagcgaagcctggctgtacctacctggaccaggaggacttcatacctttattacag
gacatagtggacacccacccaggactgacattcttgaaggatgccccagaattccattcc
cgttacatcaccaccgtgattcagcggatattctatgtggtcaaccgctcgtggacgggt
cgcatcaccatgacggaactacgaaggagcaacttcctgcagaccctggccctgttggaa
gaggaggatgatatcaaccagataacagattatttctcttatgaacatttctatgtgatc
tactgtaaattctgggagttggacacggaccatgacctttacattgaccctaaggacctg
gctcgttacaacgaccacgcatcctcaagcagaatcattgagaggttgttctcaggagcc
gtcacacggggtagttcagtgcagagagaagggaggatgagttatgcagagttcacctgg
ttcctcatctcagaggaagacaagaaaaaccctaccagtatagagtactggttcaggtgt
atggacacagacggggacggtgtgttgtctatgtttgagttggagtacttctatgaggag
cagtgtagtaggatggaggggatgggcattgaaccactacccttcacagacctgctctgt
cagatgctagacctcgtcaaacctgagagccaaggtaagataaccctgtctgatctgaag
aggtgtagaatggctcatatattcttcgacacgttcttcaacctcgagaaatacctggac
cacgagcagagagatcccttcgctttgcagaaggacatagacaacgagtgtccagagccg
tcagactgggataaatacgcctcagaggaatacgagatcctggtggcagaggagacagct
aacgaacagctgcaggagggcacgtttgatgatgactatgaggaggcggagcttccggtt
caaggagagatgattgggaataagatggataagctgctcatatcagatctgacagcgtga
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