Coregonus clupeaformis (lake whitefish): 121587438
Help
Entry
121587438 CDS
T08357
Symbol
pccb
Name
(RefSeq) LOW QUALITY PROTEIN: propionyl-CoA carboxylase beta chain, mitochondrial
KO
K01966
propionyl-CoA carboxylase beta subunit [EC:
6.4.1.3
2.1.3.15
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00280
Valine, leucine and isoleucine degradation
cclu00630
Glyoxylate and dicarboxylate metabolism
cclu00640
Propanoate metabolism
cclu01100
Metabolic pathways
cclu01200
Carbon metabolism
Module
cclu_M00741
Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
121587438 (pccb)
00640 Propanoate metabolism
121587438 (pccb)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
121587438 (pccb)
Enzymes [BR:
cclu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.3 Carboxy- and carbamoyltransferases
2.1.3.15 acetyl-CoA carboxytransferase
121587438 (pccb)
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.3 propionyl-CoA carboxylase
121587438 (pccb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Carboxyl_trans
ACCA
MdcE
Motif
Other DBs
NCBI-GeneID:
121587438
NCBI-ProteinID:
XP_041760258
LinkDB
All DBs
Position
26:complement(49067984..49071680)
Genome browser
AA seq
560 aa
AA seq
DB search
MAAFAVARSSCGLLSGLKASFKTFGQVKHGVATAAVAQSQLHQRSRRWYSVSHLSVQERI
DRKRNAALVGGGQKRIDAQHKRGKLTARERVELLLDKDSFVEYDMFVEHRCSDFGMEEDH
NKFAGDSVVTGQGRINGRLVYVFSQDFTVFGGSLSGAHAQKICKIMDQAMMVGAPVIGLN
DSGGARIQEGVESLAGYADIFLRNVMASGVVPQISLIMGPCAGGAVYSPALTDFTFMVKD
TSYLFITGPDVVKSVTNEDVTQEELGGAKTHTAVSGVAHRAFENDIDALLNLRNFFNFLP
LSNQDPXPVTECHDPSDRLVPGLDTIVPFETTKAYDMLDIIQGIVDEREFFEIMPNYAKN
IVVGFARMNGRTVGIVGNQPKVASGCLDINSSVKGARFVRFCDAFNIPILTFVDVPGFLP
GTSQEYGGIIRHGAKLLFAFAEATVPKITIITRKAYGGAYDVMSSKHLRGDVNYAWPSAE
VAVMGAKGAVQIIFRGKSNQAEQEAEYVEKFANPFPAAVRGFVDDIIVPSTTRKRICRDL
EVLASKKQTNPWKKHANIPL
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttcgctgtagcacggagcagttgtggtctgctttctggactaaaagcttct
tttaaaacattcggacaggtaaaacatggcgtggctacggcagccgttgcacagtcccag
ctgcaccagcggtcgcggcggtggtattctgtcagtcatctctccgttcaggagaggata
gaccgaaagaggaatgctgcgctggtcggaggaggtcagaagagaattgacgcgcaacac
aaaagggggaagctgacagccagagagagagttgagcttctgttggataaagactcgttt
gtggagtatgacatgtttgtggaacatcgctgctctgacttcggcatggaagaggaccac
aacaagttcgcaggggacagtgtggtgactggacagggaaggatcaacggaaggctggtg
tatgtcttcagtcaggacttcaccgtatttggaggcagtctgtctggggctcacgcacag
aagatctgtaagatcatggaccaggccatgatggtgggtgctccagtcattggtctgaac
gactctggcggagccaggatccaggagggggtggagtcactggctggatatgccgacatc
ttcctgaggaatgtgatggcttcaggtgtggttcctcagatctctctgatcatgggtccc
tgtgctggaggagctgtctactctcctgccctgaccgacttcacctttatggtcaaggac
acctcatacctgttcatcacaggccctgacgtagtgaagtctgtcaccaatgaagatgtc
actcaggaggaactgggaggagctaagacacacacagccgtgtcaggcgtcgctcaccga
gcgtttgagaacgacatcgatgctctgctcaacctccgaaacttcttcaacttccttccc
cttagcaaccaggacccgnnccccgttacagagtgccacgaccccagtgatagactggtt
cctggtctggacaccatcgttccctttgagaccactaaagcctatgacatgctggacatc
atccaggggatcgtggacgagagggagttctttgagatcatgcccaactacgctaaaaac
atcgtagtgggatttgctcgcatgaatggtcgaactgttggaatcgtagggaatcaacct
aaagtagcgtctggttgtctggacattaactcgtcagtaaagggagctcgcttcgttcgt
ttctgcgatgctttcaacatccccatcctcaccttcgtggacgtgcccggcttcctgcca
ggtacgtctcaggagtatggaggtatcatccgacacggagccaagctactgtttgccttc
gctgaggctactgtccccaagatcaccatcatcactaggaaggcctatggaggagcgtat
gacgtaatgagttccaagcacctgagaggagatgtgaactatgcctggccgtctgcagag
gtggccgtgatgggagccaagggtgctgtccagatcatcttcagagggaaatccaaccag
gcagagcaggaggctgaatacgtagagaagttcgccaaccctttccctgccgctgtcaga
gggttcgtggatgacatcattgtgccgtcgaccacccggaagaggatctgtagggacctg
gaggttctggcctccaagaaacagaccaacccctggaagaaacacgccaacatcccactc
taa
DBGET
integrated database retrieval system
