Coregonus clupeaformis (lake whitefish): 121587488
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Entry
121587488 CDS
T08357
Name
(RefSeq) synphilin-1 isoform X1
KO
K04558
synphilin-1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
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Paralog
GFIT
Motif
Pfam:
SNCAIP_SNCA_bd
Ank_2
Ank_4
Ank
Ank_3
Ank_5
Motif
Other DBs
NCBI-GeneID:
121587488
NCBI-ProteinID:
XP_041760396
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Position
18
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AA seq
838 aa
AA seq
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MDAPEYLDLDEIDFTDDSAYSVTSLKNIPELSRRNDGQGEERQAPAINWSRGVSSHSGGG
IKPTGITDVHTKFRPVKRVSPLKHQPETSDNEARAHNEEGSNKEEASDKTPAASCEGQGS
KAKSMGTGGALFGELEHYDLDMDEILDVPYIKSSHVSTLPRVPHDKRTVGSIGDGGASDR
YHGVKTSTLPHSESLGSVTQYGVLSPVKWSDMSKSKSMDPDYHRPPTGGYDHSTPGQLSC
SSASDMDKLLANRAYPEPTAHKAGGDTPGSSQALMIPLQGCAGARQDSSKTWSSIRLHGE
CDEDTKKSKNIINIIREGQISLLPHLATDNLELIRDEEGNNLLHISAAQGHADCLQHLTS
LMGEDCLNERNIHQLTPAGLGVKNGHLECVRWMVSETEAIAELSCSREHPSLIHYAARYG
QEKVLLWLLQFMQEQAISLDEVDQYGNSAVHVAAQYGHLTSIQTLVEYGSNVTVQNQGGE
RPSQSAERQGHTTCTRYLVVVETCMSLASQVVKLTKQLNEKATERIALQNQVQLLLDPSK
AEGLPSRSTSSHVMSVEAWPEMTLTAEGSPGDGHWILRQMSVDSDTVLRQLLGKDISDKV
CTKEKLSLEFQEGSREGPPSLSEANPGAKSRELKLARLKQIMQRSLSESDSDTYPPEEAK
HGARLERPSHLPITESEEPVGSLQLVMKKRTSKSMDGYNPSPTSDNSGLEAAGDFPDYNN
GQKITTSPKSALKSPSSRRKTSQNLKLRVTFDEQVVHKTGPPESEPPKGAHSKEGAGFRT
TTGSETVKRPFGAFRSIIESLSGNQNSNNNNVQTSPTGVSQGSPGRKTTGTKTSPDGH
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggatgctcctgagtacctggatttggatgagattgacttcactgacgattcagcgtat
tctgtgacatccttgaagaacattccagagctttccagaagaaacgatggtcagggagaa
gaaagacaagccccagccatcaactggagtcgcggcgtgtcgtcacatagcggcggtgga
atcaagccgaccggcatcaccgacgtccacaccaaattccgacctgtgaagagggtctcg
ccactcaaacatcaaccagagacatctgacaacgaggctcgggctcacaatgaagaaggc
agcaacaaagaggaagcctcagataaaacacctgcggcctcatgcgaaggccagggatct
aaagccaagagcatgggcaccggaggagctcttttcggggagctggagcactacgacctg
gacatggatgagatactggacgtgccttacattaaatctagccatgtctccactcttccc
agagttccccatgacaaaaggacggtgggcagcatcggggatggtggcgccagtgacagg
taccacggagttaagacctcaacacttccccactctgagagcctaggaagtgtcacccag
tacggtgtgctctcgcccgtcaagtggtctgatatgagcaagtccaaatctatggacccg
gactatcaccgcccacccactgggggctatgaccactccacaccaggccagcttagctgt
tcttcggcctcggacatggacaaacttttagccaacagggcctacccggagccaacggca
cacaaggcagggggtgacacccctgggagcagccaggctttgatgatccccctccagggc
tgtgctggggctaggcaggacagcagtaagacctggagcagtatcagactgcacggagag
tgtgatgaggataccaagaaatccaagaacatcatcaatatcatccgagaggggcagatt
tctctgttgcctcaccttgccactgataacctggagctgatccgggacgaggaggggaac
aacctgctccacatctctgcggcccagggccacgccgactgcctgcagcacctcacctcc
ctcatgggagaggactgcctcaacgagcgcaacatccaccagctcacgcctgctgggctc
ggggtgaagaatggccatttggagtgtgtgcgctggatggtgagtgaaacggaggccatc
gcagagctgagctgtagccgagagcaccccagtctcatccactacgcagcccgctacgga
caggaaaaggttctgttgtggctgctccagtttatgcaagagcaagccatttctctggat
gaagtggaccagtatggaaacagtgcagtgcatgtagccgctcagtatggccatctcact
tcaattcagaccctggtggagtacggctccaacgttaccgtgcagaaccagggcggcgag
aggccttcccagagcgcagagcggcagggccacactacttgcacccgctacctggtggtg
gtggagacgtgcatgtcgctggcttcccaggtggtcaagctcaccaagcagctcaacgaa
aaagctacagagaggatagctctacagaatcaagttcagctactcctggatccctcaaaa
gccgagggattgccttcgcgatcgacaagctcccatgtcatgtctgtggaggcgtggcct
gagatgaccctgacagcggaggggagcccgggggacggccattggatcctgaggcagatg
agcgtagactccgacacagtcttgcgccagttactgggcaaggacatctcagacaaggtg
tgcaccaaggagaagctgtctctggagttccaggagggctccagagaggggccacctagt
ctgagtgaggccaacccaggggccaagagtcgggagctgaagttggccagactcaagcag
atcatgcagcgctctctcagcgaatccgactcagacacctacccccccgaggaggccaaa
catggggcgcggctagagagacccagccacctgcccatcacagagagcgaggagcccgtc
ggcagcctgcagctggtgatgaagaagcgcacctccaagtccatggacggatacaacccc
tcgcccacgtcggacaatagtggcctggaggctgctggagatttccccgactacaacaac
ggacaaaagatcacgacgagccccaaaagtgcactcaaatcgccatcatctcgaaggaag
acctcccagaacttaaaactgagggtgacctttgacgagcaggtggttcacaagactggg
ccaccagaaagtgagccgcccaaaggtgcccacagtaaagagggggccggatttaggact
accacaggctccgagacagtgaagcgcccgttcggggcattccgctccataatagaatcg
ctgagtgggaatcagaacagcaacaataataacgtccaaacgtctcccactggtgtgtcc
cagggctcacctggcaggaaaacaactgggactaaaaccagtccagatgggcactaa
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