KEGG   Coregonus clupeaformis (lake whitefish): 121587491
Entry
121587491         CDS       T08357                                 
Name
(RefSeq) RNA-binding protein MEX3B-like
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cclu03019]
    121587491
   04121 Ubiquitin system [BR:cclu04121]
    121587491
Enzymes [BR:cclu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     121587491
Messenger RNA biogenesis [BR:cclu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     121587491
Ubiquitin system [BR:cclu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    121587491
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP KH_2 KH_KhpA-B zf-RING_2 KH_DEAH11_2nd zf-C3HC4 zf-RING_5 Prok-RING_4 zf-P11
Other DBs
NCBI-GeneID: 121587491
NCBI-ProteinID: XP_041760400
LinkDB
Position
18:complement(10792910..10797147)
AA seq 601 aa
MPSITAESAIPTLAVHAFACIGLEDHGSRTEQPETPFHPLPVSHFNVLGAVLDLQPIPRH
QRTPTEEEDEERDDYEDLLEEDDSNNTLLVQAQVSGLGSIMLPGMETPETLLLYNDELDD
GTLQQPTGMIILSSEYGEPGYEVEASLLMRRESVNTTECVLVPSSEHVAEIVGRQGCKIK
ALRAKTNTYIKTPVRGEQPMFVVTGRKEDVSMAKREILSAAEHFSLIRASRNKAGPLAAS
GSGLPGAPSLPGQTTIQVRVPYRVVGLVVGPKGSTIKRIQQQTHTYIVTPSRDKEPVFEV
TGMPENVDRAREEIETHIAMRTGNCVEIPGDENDFHYNGTDVSFEVGGCGAWLQSTAAAP
AGAQRTTNCNNSVRMTANYRNDSSSSLGSGSTDSYHGGGGNRMADFSPTSPFNANSNNNN
NGGASFWFGETLLPLAAEELAALGSPGFDPLAVTTAVPAPQPQVVWSTLEQCVQLLDGRQ
APVRDSQPGTPRLSPTFQEALEHPMAQRVHRVPFSASESQKFPVYGPAFSTSSDSTSSPP
DSCRGRQVCIRCLESEIIAALVPCGHNLFCIECANRICQGPEAVCPVCQAPVTQAIRLRN
M
NT seq 1806 nt   +upstreamnt  +downstreamnt
atgcccagtattacagctgagtcggcgatcccgacactagctgtgcatgcattcgcctgc
ataggcctcgaggaccacggcagccggacagaacaacccgagaccccctttcatccactc
ccggtctctcatttcaatgtacttggtgcggtgctggacctgcagcctataccgcgccac
caacgaacaccgacggaagaggaggacgaggaaagagacgattatgaagatttgctggag
gaggatgattccaacaacacgctgctcgtgcaggcccaagtctcaggactaggctcgatt
atgctacctggaatggagacgcccgagacactcttactgtacaatgatgagcttgatgat
ggcacgctacaacagcctacgggaatgattattttgtcgtctgagtacggagaacctggc
tatgaagttgaggcatcgctgctcatgcggagggagagcgtgaatacaacagagtgtgtg
ttggtgcccagctcagaacatgttgccgagattgtcggtagacagggttgcaagatcaag
gcattgcgagcaaagaccaacacctacatcaagaccccagtgcgaggggagcagccgatg
tttgtggtgacagggcggaaggaggatgtgtccatggcaaagagggagatcctctcggca
gctgagcacttctccctcatccgagcctcccggaacaaggcaggtccgttggcagcatca
gggtcagggctgcctggtgcaccttccctgcctggccagaccaccatccaggtgcgtgta
ccctaccgcgtggtgggactggtggtcgggccgaaggggtcgaccatcaagcgtatccaa
cagcagacacacacttacattgtcacaccgagccgagacaaagagcccgtgtttgaggtg
acgggcatgcccgagaatgtggaccgagcgcgagaggagatcgagacccacatcgccatg
cgcacgggcaactgtgtcgagattccaggagacgagaacgacttccactacaatggcacc
gatgtcagcttcgaggtgggtggctgtggggcgtggctgcaatcgaccgccgccgcacct
gccggtgcccagcgcaccaccaattgtaacaacagcgtgcgcatgacagccaactaccgc
aatgacagctccagctctctaggcagcggctccactgactcctaccacggtggagggggg
aaccgcatggccgacttcagccccaccagccccttcaacgccaacagtaacaacaacaac
aatggtggagccagcttctggtttggggagactctgctccccctggcagctgaggagctg
gcagcactgggatctcctgggtttgaccctctggcagtcactacagccgttcctgcaccg
cagccacaggtggtgtggagcaccttggaacagtgcgtccagctgttagatggccgccag
gcccctgtccgagacagccagcccggcacgcctcgcctctcccctaccttccaagaggcc
ttggaacaccccatggcccagcgggtccacagggtccccttcagcgcctcagagtctcaa
aagtttcctgtctacggccccgccttctcgacctccagtgacagtaccagctctccgcca
gactcgtgccgcggacgccaggtatgcatccgctgcctggagagtgagattatcgcagcc
ctggtgccctgcggacacaacctcttctgcatagaatgtgccaaccgaatctgccagggc
ccagaggctgtctgccctgtgtgtcaggcaccagtcacccaggccatacggctgcgcaac
atgtga

DBGET integrated database retrieval system