Coregonus clupeaformis (lake whitefish): 121587503
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Entry
121587503 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM36 isoform X1
KO
K12013
tripartite motif-containing protein 36 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121587503
04121 Ubiquitin system [BR:
cclu04121
]
121587503
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121587503
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
121587503
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121587503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
zf-B_box
SPRY
zf-RING_UBOX
ANCHR-like_BBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_5
zf-RING_2
Cdh1_DBD_1
U-box
Motif
Other DBs
NCBI-GeneID:
121587503
NCBI-ProteinID:
XP_041760427
LinkDB
All DBs
Position
18:complement(9797173..9815976)
Genome browser
AA seq
769 aa
AA seq
DB search
MSDTEDNQDMLPSLVEQIVQRITAGEVPIKSIERELICPICKELFTHPLILPCQHSVCHK
CVRELLLLNHEDSFDAGSECSLPGSPGPRSRVPSPSMERLDRLARSATLQRRSFGRRGRR
GFHFLNSCSSSISSPGWRRGSVTPRITTFPCPGCQHDVDLGERGMSMLFRNFTLESIVER
YRQAARAAVAVMCNMCKPPQQEATKSCMDCKASYCNECFKFHHPWGTPKAQHEYVGPTMN
FRPKVLMCPEHEMEKVNMYCEVCRRPVCHLCKLGGSHANHKVTTMSSAYKILKEKLSKAI
HYLISKEDQVKTQISHLEVLINETEENGQLAERRTNEHFERLFETLQERKSEMLRSIEQS
RTRRLDQLRGQVDEYQGMLENSGLVGYAQEVLKETDQSCFVQTAKQLHTRIAKSTETLRT
FHPVADPSFDEFVLDTSREETLLKELCFGGVPDPPIIDLSRSRVYNEGLVCWQLAEDTLA
TDHQVLEYRRLGVEQDEEEGGWRPTVPVYGPSTVVCDLEADSLYSFRVRSCRNSIYSPYS
PEVTFHTPPAPVFGFLFNDKCGFSSERLTLSKRRDSVESAAGMAFLLAAERVQTGSYMGL
DYIIGDTGISQGRHYWAFRVEPHSYLVKVGVASDSKLLEWMHNPRDTSSPRYDHDSGHDS
GSEDTCYDLSQPFTLLTVGMGKVFIPKASLPSAAAGNDHGNRVLPMPQRIGVCLDYEAGR
VYFYDADTMRSLYERQVDCSGTMYPAFGLMGSGKVHLEEFITAKRLSYM
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgtcggataccgaggataatcaggatatgttaccgagtttggtcgagcagatagtccag
cgaataacagcgggagaggtccctatcaagagtattgagcgggagctcatttgtccgatc
tgcaaggagctgtttacgcaccccctcatcttgccctgtcagcacagcgtttgtcacaag
tgtgtccgagagctgctgctattgaaccatgaggattctttcgatgcaggctccgagtgt
tccctccctgggagcccagggcctcgatccagagtgccctcgccaagcatggagaggctg
gataggcttgcaagatcagccacactgcagagaaggtcgtttgggaggagaggtagacgc
gggttccattttttgaatagctgtagtagctctatctcctcaccgggatggaggcgtggc
tctgtgaccccccgcatcaccaccttcccgtgcccgggttgccaacacgacgtggacctg
ggcgagcggggcatgagcatgctcttccggaactttaccctggagagcatcgtggagcgc
taccggcaggcggcccgcgctgccgtggcggtcatgtgcaacatgtgcaagccgccccag
caggaggctaccaagagctgcatggactgcaaggccagctactgcaacgagtgcttcaag
ttccaccacccctggggcacccccaaagcccagcacgagtacgtggggcccaccatgaac
tttaggcccaaggtgctgatgtgtccagagcacgagatggagaaggtgaacatgtactgc
gaggtgtgccggcgtccggtctgtcacctgtgcaagctgggaggctcccacgccaaccac
aaagtcacaaccatgagtagcgcctacaagatcctcaaggagaagctatcaaaggctatc
cattacttaatcagcaaagaggaccaagtgaagactcaaatttcccacctggaggtgttg
atcaatgaaaccgaggagaacggccagttggcggagcgtcggaccaacgagcactttgag
cgactgttcgagaccctccaggagaggaagtctgagatgctgcgctccatcgagcagtcg
aggacgcggcgtctggaccagctccggggccaggtggacgagtaccagggcatgctggag
aacagcggcctggtgggttacgcccaggaggtcctcaaggagacggaccagtcctgcttt
gttcagactgccaagcagctgcacaccaggatcgcgaaatccaccgagactctgaggaca
ttccaccctgtggccgacccctcctttgacgagtttgtgctggacacttccagagaggag
accctgctgaaggaactttgttttggtggagtccctgaccctcccatcatcgatctgtcc
cgcagtcgtgtctacaacgaaggcctggtgtgctggcagttggctgaggacaccctggcc
acagaccaccaggtgctggagtacaggaggctgggtgtcgagcaggacgaggaggagggc
ggctggcgccccacagtcccggtgtacggccccagcacagtggtgtgcgacctggaggcc
gacagcctctactcgttcagagtccgcagctgtcgcaactccatctacagcccctatagc
ccagaggtcaccttccacacaccacctgcccctgtgtttggcttcctgttcaacgacaag
tgcggcttcagctcggagcggctgacgttgagtaagcggcgtgactcggtggagagtgcg
gccggcatggccttcctgctggctgctgagcgtgtgcagacgggcagctacatgggcctg
gattacatcatcggtgacacgggcatctctcagggcagacactactgggccttccgcgtg
gagccccactcctacctggtcaaggtgggcgtggcctctgattccaagctgctggagtgg
atgcacaacccccgggacactagtagccccaggtacgaccacgacagtgggcacgacagt
ggcagcgaggacacgtgctacgatctgtcccagcccttcaccctgctcaccgtgggcatg
ggcaaagtgttcatccccaaagcgtctctcccctccgctgccgccggcaacgaccacggc
aaccgggtgctgcccatgccccagcgcattggtgtgtgcctggactacgaggcgggccgt
gtctacttctacgatgcagacaccatgagaagcctttacgagcggcaggtggactgctcc
ggtaccatgtaccccgcctttggcctcatgggtagtggcaaggtccatctagaggagttc
atcacggcaaagcgactgtcgtatatgtga
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integrated database retrieval system
