Coregonus clupeaformis (lake whitefish): 121587506
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Entry
121587506 CDS
T08357
Symbol
grid2
Name
(RefSeq) glutamate receptor ionotropic, delta-2 isoform X1
KO
K05207
glutamate receptor delta-2 subunit
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121587506 (grid2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121587506 (grid2)
Ion channels [BR:
cclu04040
]
Ligand-gated channels
Glutamate (ionotropic)
121587506 (grid2)
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF6724
Motif
Other DBs
NCBI-GeneID:
121587506
NCBI-ProteinID:
XP_041760433
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Position
18:complement(9086759..9664534)
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AA seq
1010 aa
AA seq
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MKVVSAVLFLAIFWSQEWEPVNSDSIIHIGAIFDESARKDDEVFRMAVADLNLNNEILET
EKITISVEFVDGNNPFQAVQEACELMNRGILALVTSIGCMSAGSLQSLADAMHIPHLFIQ
RAPAGTPRSSCPLITTRARQDDYTLFVRPPVYLNDVILQVVSEYSWQKFIIFYDQEYDIR
GIQDFLDKTSQQGMDVSLQKVESNINMMITSMFRTMRVEELHRYRDTLRRAVLFMSPATA
KAFITEVVETNLVAFDCHWIIINEEISDQDVQDLVMKSIGRLTLIRQTFPLPQNTSQRCV
KHNHRINTSLCDTKDPKAQTLEITNRYIYDTVLLLANTFHRKLEDRKWHSMASLTCIRKN
SKPWQGGRPMLDNVKKSGVSGLTGFLEFTDNGTNPNIYFEILGTNYGEDRGRGVIKLATW
DPVHGLNGTLTDRKLENNMRGVVLRVVTVLEEPFVMVSENVLGKPKKYQGYSIDVLDALS
NYLGFKYEIYVAPDHKYGSQQADGVWNGLIGELVAKRADMGLSALTITPERESVVDFTTR
YMDYSVGVLLRKAERTVNMFACLAPFDLSLWACIAGTVLLVGILVYLLNWLNPPRLPMGS
VSSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGVWWLFALIVISSYTANLAAFLTIS
RIENSIQSLQDLSKQTELPYGTVLDSAVYEQVRSKAMNPFERDPMYSQMWRMINRTGGAD
NNVDESKEGIRKVKYGHFAFVWDVAVLEYVGINDEDCSFYTVGNKAPDRGYGIALQHGSP
YRDIFSQRILELQQNGDMDILKLKWWPRDSPCDLYSAVHTKHRGSALDIHSFAGVFCVLA
AGVVLSCLIAMVETWWTRRKGSRVPSKEDDKEIDLEHLHHRVNSLCTEDDSPHKQFSTSS
IDLTPLDMDSMPANRQALEQISDFRNTHITTTTFIPEQIQTLSRNLSAKAQQGFAFGPVQ
DHRTGGPFRQRAPNGGFFRSPIKTMSSIPYQPTPQPNFGYGNDPDRGTSI
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgtttcagcagtgttgttccttgcaatattttggagtcaggagtgggagccc
gtgaattctgattcaatcatacacatcggggccatctttgatgagtctgccaggaaggat
gacgaggtgttccgcatggctgtggcggacctcaacctcaacaacgagatcctggagacg
gagaagatcaccatctccgtggagtttgtggacgggaacaaccctttccaggcggtccag
gaagcctgtgagttgatgaacagggggatcctggcgctggtcacctctatcggctgtatg
tcggcgggctccctgcagtcgctggcggacgccatgcacatcccgcacctcttcatccag
cgtgcccctgccgggacccctcgctccagctgccccctcatcaccacccgtgcccgccag
gacgactacaccctctttgtgcgcccgcccgtctacctcaatgacgtcatcctccaagtg
gtcagcgagtacagctggcagaagttcatcatcttctacgaccaggaatacgatatccgt
gggatccaggacttcctggacaagacgtctcagcagggcatggacgtgtcgctgcagaag
gtggagtccaacatcaacatgatgattaccagcatgttccggaccatgagggtggaggag
ctccaccgctaccgggacacgctgcgccgggccgtgctcttcatgagccctgccaccgca
aaggccttcatcactgaggttgtggagacgaacctcgtggctttcgactgtcactggatc
atcatcaatgaggagatctcagaccaggacgtccaggacctggttatgaagtctatcgga
cgtctgactctgatcagacagaccttccccctgccccagaacaccagccagcgctgcgtc
aagcacaaccaccgcatcaacacctccctctgcgacaccaaagaccccaaggctcagaca
ctggagataaccaaccgctacatctacgacacggtgctgctattggccaacacctttcac
aggaaactggaggacaggaagtggcacagcatggccagcctcacctgcatccgcaagaac
tccaagccctggcagggagggcgccccatgctagacaacgtcaaaaagtctggagtgagt
ggtctgaccggcttcctggagtttaccgacaacggaaccaaccccaacatctactttgag
atcctggggaccaattatggcgaggacagggggaggggtgtcatcaagctagccacctgg
gacccagtgcatggcctcaatggaacgctaactgacaggaagctggagaacaacatgaga
ggtgtggttctgcgcgtggtcactgtcctggaggagccctttgtgatggtatcagagaat
gtccttgggaagcctaagaagtaccaaggctattccatcgacgtgctggacgcactctcc
aactatctgggcttcaagtacgagatctatgtggcccctgaccataagtacgggagccaa
caggctgacggggtctggaacggactgatcggagagctggtcgccaagcgtgctgacatg
ggtctctcggctctcaccatcaccccagagcgggagagtgtggtagacttcaccacgcgc
tacatggactactcggtgggcgtgctgctcaggaaggctgaacgcaccgtgaacatgttc
gcctgcctggcgccctttgacctatcgctatgggcatgcatcgcgggcacggtgctactg
gtgggcatcctggtctacctgctcaactggctcaacccgccgcgcctgcccatgggctcc
gtttcctccaccaccctctacaactccatgtggttcgtctatggctcattcgtccagcag
ggtggtgaggttccgtataccaccctggccacgaggatgatgatgggagtatggtggctc
tttgctctgatcgttatctcctcctacacggccaacctggctgccttcctcaccatcagc
cgcatcgagaactccatccagtctctccaggacctgtccaagcagacagagttgccctac
gggacggtgttggactcagctgtgtacgagcaggtgcgcagtaaggccatgaaccccttc
gaaagggaccccatgtactcccagatgtggcgtatgatcaaccgcaccggaggggccgac
aacaacgtggacgagtccaaggagggcatccgcaaggtgaagtacgggcattttgccttt
gtgtgggatgtggcagtgctggagtatgtgggcatcaacgatgaggactgctccttttac
actgtggggaacaaggcaccagaccggggctacggcatcgccttgcagcacggcagtcca
tacagggacatcttctcccagaggatcctggagctgcaacagaacggggacatggacatc
ctgaagctgaagtggtggccccgggacagcccgtgtgacctgtactcggcggtgcacacc
aaacaccgcggcagcgccctggacatccacagtttcgccggcgtgttctgcgtgctggcg
gccggtgtggtgctctcctgtctcatcgccatggtggagacctggtggacaaggaggaag
ggctcacgagtcccctccaaagaggatgataaggagatcgacctggagcaccttcaccac
cgggttaacagcctgtgcacagaggacgacagcccccacaagcagttctccacctcctcc
attgacctgacgcccctggacatggactctatgccggccaaccggcaggccctggagcag
atcagcgacttccgcaacacgcacatcaccaccaccaccttcatccctgagcagatccag
accctcagccgcaacctgtccgccaaggcccaacagggcttcgccttcggtcccgtgcag
gaccaccggactggggggcccttcaggcagagagcccccaacggaggcttcttccgcagc
cccatcaagactatgtcctccataccctaccagcccactccccagcccaacttcggctac
ggcaacgaccccgatcggggtacatccatatga
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