Coregonus clupeaformis (lake whitefish): 121587523
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Entry
121587523 CDS
T08357
Name
(RefSeq) nuclear receptor subfamily 2 group F member 1-A-like isoform X1
KO
K08547
COUP transcription factor 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121587523
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cclu03310
]
121587523
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
121587523
Nuclear receptors [BR:
cclu03310
]
2. Hepatocyte nuclear factor 4 like
2F. COUP-TF like receptor
121587523
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Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
DUF8512
XS
Motif
Other DBs
NCBI-GeneID:
121587523
NCBI-ProteinID:
XP_041760469
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Position
18:complement(7482851..7490464)
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AA seq
409 aa
AA seq
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MAMVVSVWRDPQEDVVGGPPSGPNPATQPAREQQQTASAAPHTPQTPSQPGPPSTPGTAG
DKGSQNSGPQHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQ
HHRNQCQYCRLKKCLKVGMRREAVQRGRMPPTQPNPGQYALTNGDPLNGHCYLSGYISLL
LRAEPYPTSRYGSQCMQPNNIMGIENICELAARLLFSAVEWARNIPFFPDLQITDQVSLL
RLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKAL
HVDSAEYSCIKAIVLFTSDACGLSDAAHIESLQEKSQCALEEYVRSQYPNQPSRFGKLLL
RLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDMLLSGSSFNWPYMSIQ
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggtagttagcgtctggcgagatccgcaggaagacgtggtcggaggacctcca
agcggccccaatccagcaactcagccggcgagggagcaacagcagacggcgtcggcagcc
ccgcacactccgcagacccccagtcagccaggacccccgtcaacacctgggactgctgga
gacaaggggagtcagaattctggtccacagcatatagaatgtgttgtttgcggagacaaa
tcgagcggcaagcactatggtcagttcacctgcgagggatgcaaaagtttcttcaagagg
agtgtcagaaggaacttaacgtatacatgtcgtgccaataggaactgtcccattgaccaa
caccaccgaaatcagtgccaatactgtcggctgaagaaatgtttgaaagtgggaatgcgg
cgggaagcggttcagcgaggacgaatgcctccaacccaaccgaacccaggtcagtacgcg
ctgacgaacggggaccctctgaacggccattgctatctctccggatacatctccttattg
cttcgggccgaaccttacccgacgtcccgatatggaagccagtgcatgcagcccaacaat
atcatgggtatcgagaacatctgcgagctggcagctcgcttgctcttcagcgctgtggaa
tgggctaggaacatccctttctttcccgatctgcagatcaccgaccaggtgtcccttctc
aggctgacgtggagcgagctgtttgtgttaaacgcggctcagtgctccatgcctttgcat
gtggcccctctgcttgccgcggcaggcctccacgcttctccaatgtctgcagaccgagtc
gtggctttcatggatcacattcgaatcttccaggagcaggttgagaagctcaaggccctc
cacgttgactcggcagagtacagctgcatcaaggcaatagtactcttcacgtcagacgcc
tgcggcctgtcagatgcggctcacatcgaaagcctgcaggagaagtctcagtgcgccctg
gaggaatacgtgaggagccagtaccctaaccagcccagccgctttggcaagctcttgctg
cggctgccctctctccgcaccgtctcctcatcggtaattgagcagctgttcttcgtccgc
ttggtaggtaaaactcctattgaaaccctcatcagggatatgctattatccgggagcagc
ttcaactggccttacatgtccatccaatga
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