Coregonus clupeaformis (lake whitefish): 123481154
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Entry
123481154 CDS
T08357
Name
(RefSeq) RNA-binding protein Musashi homolog 2-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123481154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
123481154
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
123481154
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
123481154
NCBI-ProteinID:
XP_045074971
LinkDB
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Position
6:complement(21710870..21781952)
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AA seq
415 aa
AA seq
DB search
MEGDGSQATSGGSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFTKFGEIRECMVMRDPTTK
RSRGFGFVTYVDAASVDNVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKVFVGGLSA
NTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFEVEDVVEKVCEIHFHEINNKM
VECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLSYPNIVATYGRGYTGFAPSYSY
QFPGFPATAYGPVAAAAVAAVRGSGRGARGRGGYMAYQQNAGAGFPDYGFYSGAGPSDLR
GPPCSFADYGSLGPQAAQMLQHSEHHATSACNSPLQHHLQNSPDPFKSPGTNQARPGAFP
GTNSPGPVADLYGTPSQDSGVGNYISAASPQPGSGFGHSIAQSISGGPGKTGRSF
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggagggagacgggagccaagccacatctggaggaagccctaatgattcgcaacacgac
ccgggtaaaatgtttatcggtggtctcagctggcaaacttcaccagacagccttagagac
tattttactaaattcggggaaatcagagaatgtatggtgatgagagatccaacgacaaaa
cgctccaggggcttcgggttcgttacttacgtagatgctgccagtgtagataacgtctta
gctcagccacatcacgaattagactcaaaaacgatcgatcctaaagttgcctttcctaga
cgtgctcaacccaagatggtcacaagaacaaagaaagtattcgtaggaggattatcagcg
aacacagtagttgaagatgtgaagcagtattttgaacagtttggcaaggtagaggatgcc
atgcttatgtttgacaaaacgactaacagacacagaggtttcggctttgtaactttcgag
gttgaggacgttgtggagaaagtatgcgagatccactttcatgaaatcaataataaaatg
gtagaatgcaagaaggcccagcccaaggaggtgatgttcccgccgggtacgcgaggcagg
gccaggggcctgccctacaccatggacgcctttatgctggggatgggcatgctgagttac
ccaaacattgtagcaacgtacggccgtggatacactggttttgccccgagctacagctac
caattccctggcttcccagcgacggcgtatggaccggtggcagcagcggcagtggcggca
gtacgtggctcaggtaggggggcccgtggaagaggtggctacatggcataccagcagaac
gcaggggcagggttcccagattatgggttctattccggggccgggcccagtgacctgcgg
gggcccccctgctcctttgccgactatggctccctggggccccaggctgctcagatgctg
cagcacagtgagcatcatgccacctccgcctgcaactcccccctccagcaccaccttcag
aacagcccggacccctttaagagcccaggcaccaaccaggcccggccaggagccttccct
ggcaccaacagtcccgggcccgtggctgacctctatggcactcccagccaggactccggc
gtgggcaactacattagtgctgctagcccccagcctggctctggcttcggccacagcatt
gctcagagtatttcaggaggcccggggaagaccgggcggagtttttaa
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