Coregonus clupeaformis (lake whitefish): 123481436
Help
Entry
123481436 CDS
T08357
Name
(RefSeq) peroxisome assembly factor 2-like
KO
K13339
peroxin-6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
123481436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
123481436
Membrane trafficking [BR:
cclu04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
123481436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_33
AAA_22
DUF815
RuvB_N
AAA_5
nSTAND3
NPHP3_N
Vps4_C
RNA_helicase
TsaE
Mg_chelatase
TIP49
AAA_25
AAA_7
AAA_14
AAA_28
Parvo_NS1
IstB_IS21
AAA_17
AAA_2
AAA_24
Motif
Other DBs
NCBI-GeneID:
123481436
NCBI-ProteinID:
XP_045061492
LinkDB
All DBs
Position
20:complement(51702100..51719629)
Genome browser
AA seq
1091 aa
AA seq
DB search
MAAQVELSCLDTFPTHLNPLHVLVFKSQFRYAFPSCNEPTSTLLFTSRIRQTLGKTGVLL
CAHSTEEETPDCTADGNNTTLKLYTSKLFLKHYGLQDDIRGVVRSLSPFALRKVVIGART
RQSFKWASSDTFSNGLLILASCQGQLLLARQGDSLSLPYHPLLGDDISQVQQYLFDLVVL
ECTPITQGMITSNTTVVVTDCRDIAQRGALETSNALATRTLTSLFVSDFAHYANSLGGGS
SLLDNRQVWDSSFSAFLQALECRLDVRIVDMPRLYRQGRIVLVDKREAEIDFDSAVVVSK
QLLLKLGLFNREWVVVSTFNCSSEMTKTSYRGEYLRIPGQADENAPDKEPSKGAERVHLG
SVVVADFSKCAELDLQDNVGFISATHWFNLSNGEPVPVSSRAVKIKRWNRVLSQSGPQLS
ESLSRTASPLFAKELHLDAVISPEYSSHGPFDSILCGHFTIPRLVRLGDVLGIPSEGHPE
VLESNSEGITRWPVVYFKVKKVCGSTEEEEDQGPYLADTVHTSLYMGGSTNSLAPCSLVG
EEPSLWTSLSPPGLSSTVDQFSTIIQPHMNDSSAALTSGCTILLLGLSGSGKFTSVRAAC
RRLHLHLVKVDCVTLCADAAAACEAKMKSVFQRAEAHRPCILLLRNLQLLGQPRDGTEED
ARVMAALCQFIAHTPSSVVVVAAVSKPRELSSDVMAAFIHQVSIESPSEEQRQAMLASLS
EGLPLGRDVNLSRLAKHTAGFLLGDLSALLTQAGKAAHRRILQSCFPEGASVQEEEDLCA
CGVTVLAQDFTNALETLQDAHSQAIGAPKIPSVRWQDVGGLQQVKREILDTVQLPLERPE
LLSLGLRRAGLLLYGPPGTGKTLLAKAVATECSMTFLSVKGPELINMYVGQSEENVREVF
SKARAAAPCIIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLHSSGDVFVIGATN
RPDLLDQSLLRPGRFDKLVYVGINEDKESQLQVLKAIVRKFKVDPSVSLQDVVERCPPQL
TGADMYALCSDAMMSAIKRKIACVTDGLDTEDTPLMLSAEDFNQALDCLKPSVSEQELLK
YKLIQQKLTTK
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcaggtagaactgtcatgtttagatacatttccaacgcacttaaatcctttg
cacgtgcttgttttcaagtcacaatttagatatgcgtttccaagttgcaatgagcctact
tcgacccttttatttacctcacggatacgtcaaacactcgggaaaactggtgttttgctc
tgcgcgcactcgacagaggaggagacgccagactgtacggcggatggaaacaacacaact
ttaaaactgtacacaagtaagctctttctcaaacactatggtcttcaggatgatataagg
ggggttgtacgctcactgtcaccgtttgcccttagaaaggttgttataggggcacgaaca
agacagagtttcaagtgggcaagctcggatacgttttccaatggacttctcatactggct
tcgtgccaagggcaactactattggcacgacaaggggactcgctatcacttccctatcac
cctctacttggagatgatatatctcaagttcaacaatatctgttcgacttagttgtgttg
gagtgtacacctataacgcaggggatgataacaagcaacacaacagtggtggtcaccgac
tgcagagacatcgcgcaacgtggcgcactggaaacctctaatgctttagcaactagaact
ttgacctcgctatttgtctctgattttgcacactacgcgaatagtcttggcgggggaagc
tcattacttgacaacaggcaagtatgggactcgagtttctccgcttttttgcaagcgctg
gagtgtaggctggatgtcagaatcgtggatatgcctcgcttgtaccgtcaagggagaatt
gtactagtggacaagcgcgaggctgaaatcgatttcgacagtgctgttgtcgtaagcaaa
cagttgctgctcaaactcgggttattcaaccgtgagtgggtagtggtgtctacttttaac
tgctcatctgaaatgacaaagacgtcctacagaggcgaatacctgcgaattcccgggcaa
gccgatgagaacgcacctgacaaagagccatccaagggagccgaaagggtccacctcggc
tcggttgttgtggcagatttcagcaagtgtgccgagttggatcttcaagacaacgttggc
ttcatatcggcgactcattggttcaacttgtcaaatggagagccagtgccagtcagtagc
agagctgtgaagataaagagatggaaccgggtcctttctcagtcaggtcctcagctttct
gagagcctctctcgaacagcatcaccgctatttgccaaagaactccaccttgatgctgtc
atctccccagaatacagttctcatggtccctttgacagtatcctctgtgggcactttacc
ataccaagacttgtgcggctgggggatgttttgggaatcccatctgaagggcatcctgaa
gtcttggagagcaactctgagggaatcacaaggtggccggtcgtgtatttcaaagtgaaa
aaggtttgtggctctacagaggaggaggaagaccaaggtccttacctggcagacactgtc
cacacatctctatacatgggtggctccaccaatagcctggctccctgttcccttgttggc
gaggagccttccctctggactagcctgtctcctcctgggctctccagcactgtagaccaa
ttctccactatcatccagcctcacatgaatgacagctctgctgctctgacgagcggatgc
accatcctcctcctgggactgagtggaagtggcaaattcacctcagtcagagctgcatgc
cgtagactccatctacacttagtgaaggtggactgcgtgaccctctgcgctgacgcggcc
gccgcctgtgaggccaagatgaagtctgtcttccagcgagctgaggcccaccggccgtgc
atcctgctgctcaggaacctgcagctgctgggccagcccagggatggcaccgaggaggat
gccagggtcatggccgcactgtgccagttcattgcccacaccccttccagcgtggtcgtg
gtggcggcggtgagtaagccccgggagctgtcgtctgacgtgatggcagcctttatccac
caggtgtcgatagagagccccagtgaggagcagcgccaagctatgctggccagcctcagc
gagggcttgcccctggggagggacgtcaacctgtccaggctggccaagcacactgcgggc
tttctattgggggacctcagtgcactgctgactcaggctggtaaagccgcccacagaagg
atactccaatcctgtttcccagagggggccagtgtgcaggaggaagaggacctctgtgcc
tgtggggtaaccgtcctggcccaggacttcaccaatgcattggagaccctccaagatgcc
cactctcaggccatcggagccccaaagatccccagtgtgcgctggcaggacgttggcggc
ctgcagcaggtgaagcgggagatcctggacacggtgcagctgcccctggagaggcccgaa
ctgctgtccctgggcctgcgccgcgccgggctgctcctctacgggccccccggcacgggc
aaaaccctgctggccaaggccgtggctaccgagtgctccatgaccttcctcagtgtcaaa
ggcccggaactcatcaacatgtacgtgggtcaaagcgaggagaacgtaagagaggtgttc
tccaaagctcgagcggcggccccctgtatcatcttctttgacgagctggactctctagcg
cccaacagagggcgcagtggagactcaggtggagtcatggacagggtggtctctcagctc
ctggctgagctcgacggacttcactcctctggggacgtgtttgtgattggagccaccaac
cggccagacctgctcgatcaatcattgctcagacctggcaggtttgacaaattggtgtat
gttgggatcaatgaagacaaagagtctcagctgcaagttttgaaggccatagtcagaaag
ttcaaggtagaccccagtgtcagtctccaggatgtggtggagcgctgccctcctcagctc
acaggggcggacatgtatgctctctgctccgacgccatgatgtctgccattaagaggaag
attgcatgtgtcactgacggtctggacacagaggatactcctctcatgctgtctgccgaa
gactttaaccaagcattggattgcctcaaaccgtccgtctccgaacaagagctgctcaaa
tataaactaattcagcagaaactcaccacaaaataa
DBGET
integrated database retrieval system
