Coregonus clupeaformis (lake whitefish): 123481476
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Entry
123481476 CDS
T08357
Symbol
pus10
Name
(RefSeq) putative tRNA pseudouridine synthase Pus10
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cclu03016
]
123481476 (pus10)
Enzymes [BR:
cclu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
123481476 (pus10)
Transfer RNA biogenesis [BR:
cclu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
123481476 (pus10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
DUF1617
Motif
Other DBs
NCBI-GeneID:
123481476
NCBI-ProteinID:
XP_045061704
LinkDB
All DBs
Position
20:complement(2026065..2037700)
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AA seq
539 aa
AA seq
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MLPLKEKDRPIVKKLLEAGCCARCVLRFCCLGVQSAYRQSYEDTAKELCAFITDSENNQS
QDAAVLEQHTEDPPSKKMKMDAAETDVQSEGDSAVVPTVMEEGDAKPADSDVCVACLGVL
QELCDKAYAIKISEVVKAENYQFDTMVLSVSLPAQLSVREHSCWLHVKKEVREKSMCLDK
DDVIQVKEAFKWTMQGLVSKELGGVPVVTKISRQTEQFEVGVGFTHPETDSDCHFLAGIC
SDCFRPTKNKQNVFTRMAVVKALEKVSDEKFLKKFPCPPTRPASKCIAQDVHCLHVSVFV
AGRYNKFSRTLPQTPWVIDGERRMESSVEELIAAPLLSSFRAEGFNFSSSGREDVDVRTL
GNGRPFALELLNPHRARFNKAEVRQLQETINQSSDKIRVRDLQIVSRDAMGHMKEGEEDK
TKSYTALIWTQKAIDKDDIKFLEETKELKLAQKTPLRVLHRRPLAVRERVIHTMSTRFLD
AHHFHLKLRTQAGTYIKEFIHGDFGRTKPNLCDLLKTETDILELDVESVDVDWPPSIPE
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgttgcctctgaaggagaaagatagaccaatagtgaagaagctgctggaagctggatgc
tgcgcccgctgtgtcctgaggttctgctgcttgggggtgcagtcggcctaccgccagtct
tatgaggatacagcaaaggagctttgtgctttcatcactgattcagagaataaccaatcc
caagatgcagccgtgctggagcagcacacagaagacccccctagtaaaaaaatgaagatg
gatgccgcggagacggacgtccagtcagaaggcgactctgccgtggttcccacggtgatg
gaggaaggtgatgccaagccagcggactcggacgtgtgtgtggcgtgcctgggagttcta
caggagttatgtgataaagcctatgccataaagatatcggaggtggtgaaggccgaaaac
taccagtttgacacgatggtactgtccgtctccctaccggcccagctgtctgtcagagag
cactcttgttggctgcatgtaaagaaggaagtgagggagaagtctatgtgcctcgataag
gatgatgtcatccaggtgaaggaggccttcaagtggacaatgcagggtctggtgtccaaa
gagctggggggagtacctgtggtgaccaagatcagtcgacaaactgaacagtttgaggtg
ggcgtggggttcacacacccagagacagactcagactgccacttcctggctggcatctgt
tcagactgcttcagaccaactaagaacaaacagaatgtcttcactagaatggccgtggtc
aaagccctcgagaaggtttctgatgagaagtttctaaaaaagttcccctgtccccctaca
cggccagcgagcaaatgcatcgctcaagacgtccattgtcttcacgtttctgtatttgtg
gcggggaggtacaacaagttctcccgcaccctgccccagaccccctgggtgattgacgga
gagaggaggatggagtcttcagtggaggagctaatcgctgcacccctcctctcctctttc
cgggccgaggggtttaatttctcctcctcaggaagggaggacgtggatgtgcggacgctt
ggaaatggtcgtccgtttgcactggagctgctaaatcctcacagagccaggttcaataag
gcagaagtccgacagctgcaggagaccatcaaccagtcctcagacaaaatcagagtacga
gatctacagatcgttagcagagatgctatgggccacatgaaggagggtgaggaggacaag
accaagtcgtacaccgccctcatatggacccagaaagccatcgacaaagacgacatcaag
ttcttagaggaaaccaaagagttgaagctagctcagaaaacgccactaagagtgttgcat
cgaaggccgctggccgtcagagagcgggtcatccacaccatgagtacacgcttcctggac
gcgcatcacttccacctgaagctgcgcacgcaggcagggacttacatcaaggagtttatc
cacggagactttggtcgcaccaagcccaatctgtgtgatctgctgaagactgagacggat
atcctagagctggacgttgagtctgtagatgtggactggccaccctccatcccggagtga
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integrated database retrieval system
