Coregonus clupeaformis (lake whitefish): 123481826
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Entry
123481826 CDS
T08357
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 6-like
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
123481826
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
123481826
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
PH_13
RHG20_PH
IQ_SEC7_PH
PH_20
MCM_OB
FYVE_2
Motif
Other DBs
NCBI-GeneID:
123481826
NCBI-ProteinID:
XP_045062877
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All DBs
Position
24:complement(59937384..59966065)
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AA seq
1374 aa
AA seq
DB search
MSTGVKKPPVAPKPKLSLSVKLSPPPIAPKPDLLLSQPSQPSPLLTQPSPAALKRAKPAV
APKPCLSKPSAPAAPASPPPPRPRPRVPQTPSQECRGARDDSLSFLNSRNGILSQPILRD
LDYIIPTCSCGLQDCSQCKRLVNGNVTEVGSDTLGSWPNGNAMESTGTLVANRPGKTENG
DSEKSGGVTNSLHLRFKDKPQRQEGKRDGEGNRDEDKLQGNKEERQRDQKGQGGQEYQTG
SGDQSCNVLEVAETLTQTETETKAPNVEQIYTDSCNIDSNESDTIPTPLILPLEVSPIRT
PPQTVPPTHTPPQTVPPTRTPPQILPPILTPSQVDSKPDSTPSHTDSSTQCSRISRLPTD
LSVPAAPSKPLPVPLPRKPRKPALGRQDGLEASTQEGETKNRTQEGEVEETEGSGGRCLT
SEKEEHTQGVYDSPSPSQDPEVEEEPHPVPPPRQKSLSPRLHKAIHCPPSPYLNRNTSHS
LDLLSQPELNALTSERRGGGGEEEVEDGYGDFERYPITRSLPKQIKLSCRPPPVGMTMKA
SSVEEGGSPRAPPRKPQRHSLPAGAPPSITPPPPPPHHANTPMRELPATPQEKPAWRFPR
PFFSRQSSSRHSSGGNSGGAHQGKAALLGGKQRAQSFSSADLLARADGTKRSLSFRKLLE
LRLSVKMLPRLLARSGQSLHCTSVEPDGGERTVDQSNGSAVVSGGDGEGLMEYENVPLYE
EIPEYMNLPFLSARLGWPLTHSLDPSQHRHSDSDVYEVQDPYESHCDYKRPHSIDYERGW
HGLDDAHSEEEVHSSDEDDNSSTSSKEHLELSEEDKQQEDEVKRKKVVHIAQEIMSSEKV
FVDVLKLLHIDFRDAVAKATRQNGKPVVEERILTQILYYLPQLYQLNRDLLRELEERVAH
WGDHQRLADIFVQKGPYLKMYSTYIRQFDNNVAMLDEQCRKNPGFAAVVREFEMSPRCAS
LALKHYLLKPVQRIPQYQLLLTDYLKNLPEDSSDYKDTQAALCIVKEVANHANDIMKQGD
NFQKLMHIQYSLNGQHEIVQPGRVFLKEGTLMKLSRKVMQPRMFFLFNDTLLYTTPVQSG
QYKLNSMLSLAGMKVSKPSQEAYQNELNIESVERSFILSASSATERDEWLAAIATAIDDH
TRKKITFISSRSQEEADGVCDSGAPLGSKAPIWIPDLRATMCMVCTCEFTLTWRRHHCRA
CGKVVCQTCSSNKFYLEYLKNQPARVCDHCFVKLQENSDRVASGALSPTGRSGGFSFSRK
QKKIPAALKEVSANTENSSMSGYLQRSKGNKKQWKRLWFVIKNKVLYTYAASEDVAALES
QPLLGFFLREEKCGPFQKLQFKLYHKNTLFYIFKADDIPTAQRWIEAFQEAMIL
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaggtgtgaagaagccgccagtggctcccaaacccaaactctccctctcggtg
aagctctcacctcctcccatcgcccccaaacctgatcttctcctctcccagccttcccaa
ccctcccccctcctaacccaaccctcccctgccgcgctaaagagagccaaacccgctgtg
gcgcccaaaccatgcctctccaaaccctccgcccctgcagccccggcttctcccccaccc
cccagacccagacccagagtaccccaaactccttcccaggagtgccggggggctagggat
gacagcctctccttcctcaactccagaaacgggatcctgtcgcagcccatcctgcgcgac
ttggactacatcattcctacgtgctcctgcggactccaggactgctcccaatgcaaacga
ctagtgaatgggaacgttacagaggtcggaagcgatacactcggctcctggcctaacggg
aatgccatggaaagcactggaacgctggtagccaatcggccgggtaaaacagagaatgga
gacagtgagaagagcggaggagtgaccaacagcctccatctcaggttcaaggacaaaccc
cagagacaggaggggaagagggatggagagggaaacagggatgaggacaagctgcagggg
aacaaagaggagagacagagggaccagaaaggtcagggtggtcaggagtatcagactggg
tcaggggaccagtcgtgtaatgttcttgaggtggcagagacacttacacagactgagact
gagactaaagctcctaatgtagaacagatatacactgacagctgtaatatagacagcaat
gagagcgacacaattcccactcccctcatcctcccactggaagtctcccccattcgcacc
ccccctcagacagtcccccccacccacaccccccctcagactgtcccacccacccgcacc
cccccacagattttaccccccatcctcacaccctcccaggtggacagtaagcctgatagc
accccctcccacacagacagcagtacacagtgttccagaatatccaggctacccactgac
ctctcggtccctgccgcccccagtaagcccctgcccgtgccgctgccacgcaagccccgt
aagccagccctgggaaggcaggacggcctggaggccagcacccaggagggggagacaaag
aaccgcacacaggagggagaggtggaggagactgaggggagtggggggagatgtctcacc
tcagagaaggaagaacacacccagggagtgtatgacagtccctcaccctcccaggaccct
gaagttgaagaggagcctcaccctgtgcctccaccgaggcagaagtccctctccccccgc
ctccacaaagccatccactgtcccccctccccctatctcaaccgaaacacctcccactct
ctggacctgctctctcagcctgagcttaacgcactgacctcagagagaagaggaggagga
ggggaggaagaagttgaggacgggtacggagactttgagcgctaccccatcacccggagc
ctgcccaaacagatcaagctgagctgccgcccgccccccgtcggcatgacaatgaaggcc
agctcggtggaagagggcgggtcacccagggccccacccaggaagccccagagacacagc
ctgccagcgggcgcccccccgtccatcaccccccctccaccccctccgcaccacgccaac
acccccatgagggagctgccagccaccccacaggagaaaccagcctggcgcttccccagg
ccattcttcagcaggcagagctcctccagacacagcagtggcggcaacagcggaggggcc
caccaagggaaagcagctctgctgggggggaaacagagggcccagtccttctcctcagct
gacctgctggcccgcgccgacggcaccaagaggagtctctccttccgaaagcttctggag
ctgcggctgtctgtcaagatgttgccacggttactggccagaagtggccagtctctgcat
tgtaccagcgtggagccggatgggggggagaggacggtggaccagtccaacggcagcgcg
gtggtgtctggtggggatggagaggggttgatggagtatgagaacgttcctctgtatgag
gagataccggagtacatgaacctgcctttcctcagcgcacggctgggctggccactcaca
cacagtctggacccaagccaacacagacacagtgactcagatgtctatgaggtgcaggat
ccctacgagagccactgcgactataagcgaccccattccattgactatgagaggggctgg
catggattggacgatgctcactctgaggaggaagtccacagctctgatgaggatgacaac
agctccacctccagcaaggaacacctggagctgtcagaagaagacaaacagcaggaggat
gaggtgaagaggaaaaaggtggtgcacatcgcccaggagatcatgagctccgagaaagtg
tttgtggacgtcctgaagcttcttcacatagatttccgggacgcagttgccaaggcgacg
cgtcagaatggcaagccggtggttgaagagcgtattctaacccagatcctctactatctg
ccccaactataccagctcaaccgagacctgctccgggagctagaggagagagtggcccac
tggggggaccaccagagactggcagacatctttgttcagaaggggccgtacctgaagatg
tactccacctacatccgccagtttgacaacaacgtggctatgctggatgaacaatgtagg
aaaaaccctggcttcgccgctgtggtccgggagtttgagatgagtcctcgatgtgccagc
ctggctctgaagcactacctgctgaaacctgtacagagaatcccccagtatcagctactg
ctcacagattatctgaagaaccttcctgaggactcgtctgactacaaagacacacaggct
gctctatgcatagtgaaggaggtggccaaccatgccaacgacatcatgaaacaaggggat
aactttcaaaagctgatgcacattcagtacagtctgaacggacagcatgagattgttcag
ccgggcagggtgttccttaaggagggtactctgatgaagctgtccaggaaggtcatgcag
ccacggatgttcttcctgttcaatgacactcttctgtacaccactccagttcaatctggt
cagtataaactcaacagcatgctctctctggcaggcatgaaggtgagtaagcccagtcag
gaggcgtatcagaatgaactgaatattgagagtgtggagcgttccttcatcctgtctgcc
agctcggccacagagagagatgagtggctggcggccatcgccacggcgatagacgaccac
accaggaagaagatcaccttcatctccagccggagtcaagaggaggctgatggtgtatgt
gacagtggggccccgctgggttctaaggcccctatctggatcccagacctgagggccacc
atgtgtatggtctgtacctgtgagttcaccctcacctggagacgccaccactgccgagcc
tgcgggaaggtggtgtgtcagacgtgctcgtccaataagttctatctggagtacttgaag
aaccagccggctcgtgtgtgtgaccactgcttcgtcaagctgcaggagaacagtgaccgt
gttgcatctggggcgctgtctcctactggcagatccgggggattctctttctccaggaaa
cagaagaagatcccagctgctctcaaagaggtgtctgcaaacacagagaactcctccatg
agtggctacctacagaggtcaaagggcaacaagaagcaatggaagaggctatggttcgtc
atcaagaacaaagtcctgtacacctacgccgccagcgaggacgtagccgctctagagagc
cagcctctgctaggcttcttcctgcgggaggagaagtgtggccctttccagaagctgcag
tttaaactgtaccacaaaaacaccctgttttatatcttcaaggctgacgacatccccact
gcacagagatggatagaggctttccaggaggccatgattctttaa
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