Coregonus clupeaformis (lake whitefish): 123481852
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Entry
123481852 CDS
T08357
Name
(RefSeq) nucleoporin Nup37-like
KO
K14302
nuclear pore complex protein Nup37
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123481852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
123481852
03036 Chromosome and associated proteins [BR:
cclu03036
]
123481852
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123481852
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
123481852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
WD40_RFWD3
WDR55
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_EIPR1
EIF3I
Motif
Other DBs
NCBI-GeneID:
123481852
NCBI-ProteinID:
XP_045063299
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Position
24:complement(60243202..60255016)
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AA seq
326 aa
AA seq
DB search
MEDSGRGASYTVPCDDYVHVVEFSPFDSGSAASLLAYGGNQYVVVGTCRFQEEDMEVEGV
EFTTLRVFHHALRVDCLAWSPESRLDKLPQLIRFCTAAADRKVRLLTSDLQNKHEVKVME
GHTSYINHLVFEPTEGKQIASVSDDHTCRVWDLEGNETTTFRLRSPGVTVCWHPEDVFKL
MVAEKKGTIRFYDLVTQQAILSLDCGQSPLMSADWCLTNTIKVGAVTGSDWVIWDITRSS
YPQEKRPAHVERAGNFRWSRANENLFSTTGCPGKISSQLLVHHLGHPESPVMIGSATVGA
GLSWHRSLPLCVIGGDRKLSFWMTEM
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggaggactccggtcggggagccagctacacagtaccctgtgacgactacgtccatgtg
gtggagttcagcccctttgacagtggctcagctgcgtccctcctggcctatggaggaaac
cagtatgtggtggtcggtacctgccgcttccaggaggaggacatggaggtagagggggtt
gaattcaccacactgcgtgttttccatcatgcgttacgtgtggattgccttgcatggagc
cctgagtctcggctggacaagctgccccaactcatcagattttgcactgcagcagcagac
agaaaagtgaggctgttgacttctgatcttcagaataaacatgaagtcaaggtgatggaa
ggtcacaccagctacatcaaccacttagtgttcgaacccacagaggggaaacaaatcgct
tcggtcagcgacgaccatacatgcagggtgtgggacctggagggcaatgaaaccactaca
ttcagactacgctcccctggcgtcactgtgtgctggcatcctgaagatgtcttcaagctg
atggtggccgagaagaaggggacgatccgcttctatgaccttgttacccagcaggccatt
ctttctctggattgtggccagtcgccgctcatgtcggccgactggtgcctcaccaacacc
atcaaggtgggtgcggtgacgggcagcgactgggtcatctgggatatcacccgctccagt
tacccacaagagaagaggcctgcccatgtagaacgagcaggaaacttcaggtggtctcgg
gccaatgagaatctcttctccacaacaggatgtccaggcaagatcagcagtcagttacta
gtgcatcacttgggtcacccagagtcacccgtgatgattggatcagccacggtgggggcg
ggtctaagctggcacaggtccctcccactctgtgtaattggcggtgaccgaaagctctct
ttttggatgacagaaatgtaa
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integrated database retrieval system