KEGG   Coregonus clupeaformis (lake whitefish): 123482015
Entry
123482015         CDS       T08357                                 
Symbol
cldn3c
Name
(RefSeq) claudin 3c
  KO
K06087  claudin
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03272  Virion - Hepatitis viruses
cclu04382  Cornified envelope formation
cclu04514  Cell adhesion molecules
cclu04530  Tight junction
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    123482015 (cldn3c)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    123482015 (cldn3c)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    123482015 (cldn3c)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    123482015 (cldn3c)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:cclu03037]
    123482015 (cldn3c)
   04147 Exosome [BR:cclu04147]
    123482015 (cldn3c)
   04515 Cell adhesion molecules [BR:cclu04515]
    123482015 (cldn3c)
Cilium and associated proteins [BR:cclu03037]
 Other cilia and associated proteins
  Stereociliary proteins
   123482015 (cldn3c)
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   123482015 (cldn3c)
  Exosomal proteins of colorectal cancer cells
   123482015 (cldn3c)
Cell adhesion molecules [BR:cclu04515]
 Immunoglobulin superfamily
  L1 family
   123482015 (cldn3c)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 DUF4153 TMEM37 Clc-like Phage_holin_3_6 DUF308
Other DBs
NCBI-GeneID: 123482015
NCBI-ProteinID: XP_045064109
LinkDB
Position
27:complement(36168113..36170729)
AA seq 218 aa
MSMGMEIVGIALGVIGFILGIVVCAMPMWKVTAFIGANIVTAQTIWEGLWMNCVTQSTGQ
MQCKIYDSMLALPQDLQAARAMTIIAIVLGILGVMVSIVGAKCTNCIEDEPSKAKVMIIS
GIFFILAGILILIPVSWSANTIIRDFYNPLLVESQRRELGASLYIGWGSAVLLLIGGAML
CCTCPPKEEKRYKPPRMAYSAPRSVSGGTAGYDRKDYV
NT seq 657 nt   +upstreamnt  +downstreamnt
atgtcgatgggcatggagattgtgggcatcgccctgggagtcataggattcatcctgggc
atcgtggtctgtgccatgcccatgtggaaggtgacagccttcatcggagccaacatcgtc
acagcccagaccatctgggaagggttatggatgaactgtgtgacccagagcacgggacag
atgcaatgtaagatctatgactccatgctggccttaccccaggacctgcaggctgccaga
gccatgactatcatcgccattgtcctggggattctaggggtgatggtctccatcgtcgga
gccaagtgcaccaactgcatcgaggacgaaccctccaaagctaaagtcatgatcatctcc
ggaatcttcttcatcctggccggtatcctcatccttatccctgtgtcctggtcggccaac
accatcatccgagacttctacaacccccttttggtggagtcccagaggagggagctggga
gcctcactctacatcggctgggggtcggcggtcctgctccttatcggaggagccatgctg
tgctgcacctgcccccccaaggaggagaagaggtacaagcccccccgcatggcctactcc
gcccctcgcagcgtgagcgggggcacagcgggatacgacaggaaggactacgtctga

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