Coregonus clupeaformis (lake whitefish): 123482126
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Entry
123482126 CDS
T08357
Name
(RefSeq) RNA-binding protein 12B-like
KO
K24526
RNA-binding protein 12
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
123482126
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
123482126
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
123482126
NCBI-ProteinID:
XP_045064512
LinkDB
All DBs
Position
28:12221812..12227739
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AA seq
664 aa
AA seq
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MAVVIRLQGLRITAGSEDIRKFFTGLKIPDGGVHIIGGEREEAFIIFASDEDARRAMTRS
GGSIKGSPVRLRLSSKSEMQAVLKESIKPEVTKKRSSKEGFRRPEREGRNEKPRKKDNVE
MGSRSVSYSDTRSLARKPSSQPSSQNDLYLLMQGMPFTTTEENVRKFFDGLVVEDIIMMK
NDSGQQNGKGIVKFETRLDAREGLKRDRHYIGTRFVEVYACSEEQWFEAGGGMEPGKDSS
GTFRRGPSSAHTLRYPPDRARSRSPVAYRSTKSSSPPNEEFCVLVENLPYLVEKRDIKEL
FHPADLKYDQILHLHDRYGKKTRSIFVLFRSLRDYCAALTLHKQEFLNRYVYISPISKEK
MVAILESGENPRDGAPPSERSYSRSQERLPRETEKDSYESDKICLYVRNLPFDVRKVEIV
DFFLGFRISEETVVLLRDHKGNGLGEALVIFQTEEEAMRAQSLNGQGFLGANVILKCISL
AQMREFGVGEPAVTEQQMIPRERSSERYSARKSEAMSHLYTDYSVTPDIGHLPMDDRQVH
IHGGSSLGLGLDSHMMEIPVLLNNRGNGSAHGHGDYGPSAPQQFDGPTCLRLVNLPSTIR
IDEIYDFCYGYRVIPGSVSLQYNNKGIPKGSATVVFESRLEALTAVEELSGRPICSRKVK
LVFV
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtcatccgtttacaggggctcagaatcactgcaggttctgaggacattcgc
aagttcttcactggcctcaaaatcccagatggtggggtgcacattattggtggggagcgt
gaggaggctttcataatttttgcttccgatgaagatgcgaggcgggcaatgacccgttcg
gggggatccatcaaaggttctccggttcgcttacggctgagcagcaagtcagaaatgcag
gctgttctcaaggaaagtataaaacctgaggtgaccaaaaagaggtcgtccaaggaaggt
ttcagaagaccggaaagagaaggcaggaatgagaaacctagaaaaaaagacaatgtggag
atgggcagtagatcagtgtcgtacagtgacacacgtagtctggcccgaaagccttcctca
cagccaagcagtcaaaatgacttgtatttgcttatgcaaggcatgcctttcactacgaca
gaagagaatgtgaggaaattctttgacggattagtggtggaggacattattatgatgaaa
aatgacagcggccaacaaaatgggaaaggaattgtcaagtttgaaaccagactggatgct
agagagggtctgaaaagggatcggcattacattggaaccaggtttgtggaagtctatgca
tgctcagaagagcagtggtttgaggcaggtggtggtatggaacctggtaaagacagcagt
ggtacgtttagaagaggtccatcctcagctcacactctgaggtatcctccagaccgtgcc
aggtctcgctcaccagtagcctacaggtcaacaaagtcctcttctcctcccaatgaggag
ttctgtgtcttggtggaaaacctcccctacttagtggagaagagagacataaaggagctc
ttccatcctgcagacctcaagtatgaccagatccttcaccttcatgacaggtatgggaaa
aagactaggtccatatttgtgcttttcagaagcctgagggactactgtgctgccttgact
cttcacaagcaggaatttctcaaccgatatgtgtacatatctcctatttcaaaagagaaa
atggtcgccattctagaatctggggaaaatccaagggatggggcacccccctctgaaagg
tcttacagcagatctcaggaaaggcttccaagagagaccgagaaggactcgtatgaatct
gacaagatttgcctctatgtgcgcaatctgccttttgacgtgcgcaaagttgagattgtg
gacttcttccttggcttcaggatctcggaggagactgttgttttgctgcgtgaccataag
ggcaatggacttggagaggctttggtgatctttcagactgaggaggaggctatgagggcg
cagtctctgaatggacaagggtttcttggagcaaacgtcatcctgaaatgcatttctctg
gctcagatgcgtgaatttggtgttggtgaacctgcagtgacagagcagcagatgatacca
agggagagaagctcagagaggtactcggccaggaagagtgaggcgatgtcccatctgtac
actgattacagtgtcacccctgatataggccatcttcctatggacgaccggcaggttcat
attcatggaggcagcagtctgggtctgggtctggattctcacatgatggaaatccctgtt
ctgcttaataacaggggcaatggatctgctcatggacatggagactatggaccttctgcc
ccccagcagtttgatggtccaacgtgcctgagactggttaatctgccttcgactatcaga
attgacgaaatctatgacttttgctatggatatcgtgtaattcctggatccgtctcattg
cagtacaacaacaaagggattcccaaaggctcagcaacggttgtttttgaatctcgcttg
gaggcgttaacggcagttgaggaattgagtggaagaccaatatgcagcagaaaagtcaaa
ctagtttttgtgtga
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