KEGG   Coregonus clupeaformis (lake whitefish): 123482126
Entry
123482126         CDS       T08357                                 
Name
(RefSeq) RNA-binding protein 12B-like
  KO
K24526  RNA-binding protein 12
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cclu03041]
    123482126
Spliceosome [BR:cclu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    123482126
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 123482126
NCBI-ProteinID: XP_045064512
LinkDB
Position
28:12221812..12227739
AA seq 664 aa
MAVVIRLQGLRITAGSEDIRKFFTGLKIPDGGVHIIGGEREEAFIIFASDEDARRAMTRS
GGSIKGSPVRLRLSSKSEMQAVLKESIKPEVTKKRSSKEGFRRPEREGRNEKPRKKDNVE
MGSRSVSYSDTRSLARKPSSQPSSQNDLYLLMQGMPFTTTEENVRKFFDGLVVEDIIMMK
NDSGQQNGKGIVKFETRLDAREGLKRDRHYIGTRFVEVYACSEEQWFEAGGGMEPGKDSS
GTFRRGPSSAHTLRYPPDRARSRSPVAYRSTKSSSPPNEEFCVLVENLPYLVEKRDIKEL
FHPADLKYDQILHLHDRYGKKTRSIFVLFRSLRDYCAALTLHKQEFLNRYVYISPISKEK
MVAILESGENPRDGAPPSERSYSRSQERLPRETEKDSYESDKICLYVRNLPFDVRKVEIV
DFFLGFRISEETVVLLRDHKGNGLGEALVIFQTEEEAMRAQSLNGQGFLGANVILKCISL
AQMREFGVGEPAVTEQQMIPRERSSERYSARKSEAMSHLYTDYSVTPDIGHLPMDDRQVH
IHGGSSLGLGLDSHMMEIPVLLNNRGNGSAHGHGDYGPSAPQQFDGPTCLRLVNLPSTIR
IDEIYDFCYGYRVIPGSVSLQYNNKGIPKGSATVVFESRLEALTAVEELSGRPICSRKVK
LVFV
NT seq 1995 nt   +upstreamnt  +downstreamnt
atggcggtggtcatccgtttacaggggctcagaatcactgcaggttctgaggacattcgc
aagttcttcactggcctcaaaatcccagatggtggggtgcacattattggtggggagcgt
gaggaggctttcataatttttgcttccgatgaagatgcgaggcgggcaatgacccgttcg
gggggatccatcaaaggttctccggttcgcttacggctgagcagcaagtcagaaatgcag
gctgttctcaaggaaagtataaaacctgaggtgaccaaaaagaggtcgtccaaggaaggt
ttcagaagaccggaaagagaaggcaggaatgagaaacctagaaaaaaagacaatgtggag
atgggcagtagatcagtgtcgtacagtgacacacgtagtctggcccgaaagccttcctca
cagccaagcagtcaaaatgacttgtatttgcttatgcaaggcatgcctttcactacgaca
gaagagaatgtgaggaaattctttgacggattagtggtggaggacattattatgatgaaa
aatgacagcggccaacaaaatgggaaaggaattgtcaagtttgaaaccagactggatgct
agagagggtctgaaaagggatcggcattacattggaaccaggtttgtggaagtctatgca
tgctcagaagagcagtggtttgaggcaggtggtggtatggaacctggtaaagacagcagt
ggtacgtttagaagaggtccatcctcagctcacactctgaggtatcctccagaccgtgcc
aggtctcgctcaccagtagcctacaggtcaacaaagtcctcttctcctcccaatgaggag
ttctgtgtcttggtggaaaacctcccctacttagtggagaagagagacataaaggagctc
ttccatcctgcagacctcaagtatgaccagatccttcaccttcatgacaggtatgggaaa
aagactaggtccatatttgtgcttttcagaagcctgagggactactgtgctgccttgact
cttcacaagcaggaatttctcaaccgatatgtgtacatatctcctatttcaaaagagaaa
atggtcgccattctagaatctggggaaaatccaagggatggggcacccccctctgaaagg
tcttacagcagatctcaggaaaggcttccaagagagaccgagaaggactcgtatgaatct
gacaagatttgcctctatgtgcgcaatctgccttttgacgtgcgcaaagttgagattgtg
gacttcttccttggcttcaggatctcggaggagactgttgttttgctgcgtgaccataag
ggcaatggacttggagaggctttggtgatctttcagactgaggaggaggctatgagggcg
cagtctctgaatggacaagggtttcttggagcaaacgtcatcctgaaatgcatttctctg
gctcagatgcgtgaatttggtgttggtgaacctgcagtgacagagcagcagatgatacca
agggagagaagctcagagaggtactcggccaggaagagtgaggcgatgtcccatctgtac
actgattacagtgtcacccctgatataggccatcttcctatggacgaccggcaggttcat
attcatggaggcagcagtctgggtctgggtctggattctcacatgatggaaatccctgtt
ctgcttaataacaggggcaatggatctgctcatggacatggagactatggaccttctgcc
ccccagcagtttgatggtccaacgtgcctgagactggttaatctgccttcgactatcaga
attgacgaaatctatgacttttgctatggatatcgtgtaattcctggatccgtctcattg
cagtacaacaacaaagggattcccaaaggctcagcaacggttgtttttgaatctcgcttg
gaggcgttaacggcagttgaggaattgagtggaagaccaatatgcagcagaaaagtcaaa
ctagtttttgtgtga

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